Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3Q9BZ76 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 AC092474.2-201ENST00000424288 719 ntBASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 AC005034.1-201ENST00000426657 489 ntBASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 AC245100.3-201ENST00000441281 285 ntBASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 AL035252.4-201ENST00000624174 288 ntBASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 LINC01521-201ENST00000504184 1943 ntBASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3Q9BZ76 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CNTNAP3Q9BZ76 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNTNAP3Q9BZ76 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNTNAP3Q9BZ76 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNTNAP3Q9BZ76 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 AL160286.2-201ENST00000567150 934 ntBASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 AC011484.1-201ENST00000377652 1995 ntBASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3Q9BZ76 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 NSUN5P1-202ENST00000421140 1535 ntBASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 NSUN5P2-203ENST00000457352 1529 ntBASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 HLA-V-201ENST00000429037 534 ntBASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 SNHG9-202ENST00000564014 471 ntBASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3Q9BZ76 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 AL391807.1-203ENST00000604392 2365 ntBASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3Q9BZ76 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms