Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL356309.3-201ENST00000624132 1934 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 MTDHP3-201ENST00000594186 672 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AC010240.3-201ENST00000607688 395 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 COX5BP8-201ENST00000416911 349 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 GUSBP12-201ENST00000513727 720 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AC010336.2-201ENST00000564226 506 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AP000867.4-201ENST00000641616 219 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 TFAMP1-201ENST00000412727 736 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 MIR6805-201ENST00000615055 62 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 AP005117.1-201ENST00000584346 1413 ntBASIC5.73□□□□□ -1.49
HMCN1Q96RW7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC5.73□□□□□ -1.49
HMCN1Q96RW7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC105339.3-201ENST00000560043 636 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 KRT8P11-201ENST00000409686 1436 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC242852.2-201ENST00000615738 1807 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 INIP-202ENST00000374236 874 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 BASP1P1-201ENST00000430708 665 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC092658.1-201ENST00000505836 891 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC055876.3-201ENST00000431496 288 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 COG4-212ENST00000564653 590 ntTSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms