Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX18Q96RF0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.13■□□□□ 0.33
SNX18Q96RF0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SNX18Q96RF0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 IRX1P1-201ENST00000438849 1838 ntBASIC17.12■□□□□ 0.33
SNX18Q96RF0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.12■□□□□ 0.33
SNX18Q96RF0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 AL139384.1-201ENST00000612143 3047 ntBASIC17.12■□□□□ 0.33
SNX18Q96RF0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX18Q96RF0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX18Q96RF0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX18Q96RF0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX18Q96RF0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 AC009053.2-201ENST00000563701 2365 ntBASIC17.1■□□□□ 0.33
SNX18Q96RF0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.1■□□□□ 0.33
SNX18Q96RF0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX18Q96RF0 TSPY21P-201ENST00000433481 731 ntBASIC17.1■□□□□ 0.33
SNX18Q96RF0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms