Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 AC016405.3-201ENST00000607710 860 ntBASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP6Q96FZ7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 MCRIP2P1-201ENST00000394346 511 ntBASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 AC012317.2-201ENST00000623305 2251 ntBASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHMP6Q96FZ7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 AC006015.1-201ENST00000429970 570 ntBASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 AC007322.4-201ENST00000509611 723 ntBASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 AC022517.1-201ENST00000592429 346 ntBASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 AC008694.1-202ENST00000636953 945 ntBASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
CHMP6Q96FZ7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms