Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 RCC2P3-201ENST00000418112 1537 ntBASIC18.85■□□□□ 0.61
SIPA1Q96FS4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 AC011498.5-201ENST00000592027 486 ntBASIC18.85■□□□□ 0.61
SIPA1Q96FS4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 AL157888.1-201ENST00000631930 593 ntBASIC18.85■□□□□ 0.61
SIPA1Q96FS4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 AL109659.2-201ENST00000606809 1674 ntBASIC18.85■□□□□ 0.61
SIPA1Q96FS4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.85■□□□□ 0.61
SIPA1Q96FS4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 AL512353.2-201ENST00000448759 1962 ntBASIC18.84■□□□□ 0.61
SIPA1Q96FS4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 AC092119.3-201ENST00000612618 583 ntBASIC18.84■□□□□ 0.61
SIPA1Q96FS4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIPA1Q96FS4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.83■□□□□ 0.61
SIPA1Q96FS4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIPA1Q96FS4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIPA1Q96FS4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SIPA1Q96FS4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SIPA1Q96FS4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIPA1Q96FS4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 BX276092.5-203ENST00000456199 560 ntBASIC18.83■□□□□ 0.6
SIPA1Q96FS4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 MIR3917-201ENST00000580971 93 ntBASIC18.83■□□□□ 0.6
SIPA1Q96FS4 AL121672.3-201ENST00000608644 468 ntBASIC18.83■□□□□ 0.6
SIPA1Q96FS4 NPAP1P7-201ENST00000613027 823 ntBASIC18.83■□□□□ 0.6
SIPA1Q96FS4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms