Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 AL162377.1-201ENST00000618844 1793 ntBASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 AC005104.2-201ENST00000427818 678 ntBASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 AC073648.2-201ENST00000510116 352 ntBASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 POM121L3P-201ENST00000419331 1163 ntBASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 AC093909.1-201ENST00000504731 1122 ntBASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 MIR5100-201ENST00000579544 119 ntBASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 AL591684.3-201ENST00000605187 298 ntBASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM43Q96BQ3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 HMGN1P19-201ENST00000436976 333 ntBASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 AC018712.1-201ENST00000455767 687 ntBASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 BNIP3P18-201ENST00000593976 575 ntBASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 AC024563.2-201ENST00000603282 481 ntBASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 MIR7706-201ENST00000613747 67 ntBASIC20.4■□□□□ 0.86
TRIM43Q96BQ3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM43Q96BQ3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM43Q96BQ3 AL512353.2-201ENST00000448759 1962 ntBASIC20.39■□□□□ 0.86
TRIM43Q96BQ3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRIM43Q96BQ3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM43Q96BQ3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM43Q96BQ3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 AL353692.3-201ENST00000407031 1396 ntBASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 MIR564-202ENST00000385049 94 ntBASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM43Q96BQ3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 AC139887.3-201ENST00000568585 713 ntBASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 AC011840.4-201ENST00000578471 627 ntBASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms