Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HPS3Q969F9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS3Q969F9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS3Q969F9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS3Q969F9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS3Q969F9 AC005082.1-201ENST00000413042 2259 ntBASIC20.87■□□□□ 0.93
HPS3Q969F9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HPS3Q969F9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.86■□□□□ 0.93
HPS3Q969F9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS3Q969F9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS3Q969F9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HPS3Q969F9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS3Q969F9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.86■□□□□ 0.93
HPS3Q969F9 DGCR10-201ENST00000609839 495 ntBASIC20.86■□□□□ 0.93
HPS3Q969F9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HPS3Q969F9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HPS3Q969F9 KRT8P32-201ENST00000512863 1461 ntBASIC20.86■□□□□ 0.93
HPS3Q969F9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HPS3Q969F9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.86■□□□□ 0.93
HPS3Q969F9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS3Q969F9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS3Q969F9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS3Q969F9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HPS3Q969F9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HPS3Q969F9 AL596275.1-201ENST00000423464 877 ntBASIC20.85■□□□□ 0.93
HPS3Q969F9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS3Q969F9 AC093827.2-201ENST00000512654 315 ntBASIC20.85■□□□□ 0.93
HPS3Q969F9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS3Q969F9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS3Q969F9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS3Q969F9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.85■□□□□ 0.93
HPS3Q969F9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HPS3Q969F9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.84■□□□□ 0.93
HPS3Q969F9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS3Q969F9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS3Q969F9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.84■□□□□ 0.93
HPS3Q969F9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.84■□□□□ 0.93
HPS3Q969F9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
HPS3Q969F9 MIR4785-201ENST00000585005 73 ntBASIC20.84■□□□□ 0.93
HPS3Q969F9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS3Q969F9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS3Q969F9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
HPS3Q969F9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS3Q969F9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS3Q969F9 RCC2P3-201ENST00000418112 1537 ntBASIC20.83■□□□□ 0.93
HPS3Q969F9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.83■□□□□ 0.93
HPS3Q969F9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms