Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMARCC1Q92922 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC24.05■■□□□ 1.44
SMARCC1Q92922 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.05■■□□□ 1.44
SMARCC1Q92922 VENTXP7-201ENST00000475503 772 ntBASIC24.05■■□□□ 1.44
SMARCC1Q92922 AL671883.3-201ENST00000603274 991 ntBASIC24.05■■□□□ 1.44
SMARCC1Q92922 AC064862.7-201ENST00000604520 867 ntBASIC24.05■■□□□ 1.44
SMARCC1Q92922 REXO1L6P-202ENST00000619970 1078 ntBASIC24.05■■□□□ 1.44
SMARCC1Q92922 AC124864.1-201ENST00000623408 392 ntBASIC24.05■■□□□ 1.44
SMARCC1Q92922 AC117500.6-201ENST00000624871 588 ntBASIC24.05■■□□□ 1.44
SMARCC1Q92922 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
SMARCC1Q92922 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC1Q92922 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC1Q92922 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC1Q92922 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC1Q92922 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 AL590627.1-203ENST00000421194 1026 ntBASIC24.04■■□□□ 1.44
SMARCC1Q92922 TSPY12P-201ENST00000421279 868 ntBASIC24.04■■□□□ 1.44
SMARCC1Q92922 TEN1-204ENST00000588202 862 ntTSL 3 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC1Q92922 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC1Q92922 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC1Q92922 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC1Q92922 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SMARCC1Q92922 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC1Q92922 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC1Q92922 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC1Q92922 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC1Q92922 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 AC024563.2-201ENST00000603282 481 ntBASIC24.03■■□□□ 1.44
SMARCC1Q92922 NSUN5P1-202ENST00000421140 1535 ntBASIC24.03■■□□□ 1.44
SMARCC1Q92922 NSUN5P2-203ENST00000457352 1529 ntBASIC24.03■■□□□ 1.44
SMARCC1Q92922 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC1Q92922 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SMARCC1Q92922 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 AC034236.2-201ENST00000606662 1610 ntBASIC24.02■■□□□ 1.44
SMARCC1Q92922 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC1Q92922 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SMARCC1Q92922 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SMARCC1Q92922 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC1Q92922 Z82202.1-201ENST00000623446 1880 ntBASIC24.01■■□□□ 1.43
SMARCC1Q92922 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SMARCC1Q92922 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC1Q92922 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC1Q92922 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC1Q92922 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC1Q92922 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.01■■□□□ 1.43
SMARCC1Q92922 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC1Q92922 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC24.01■■□□□ 1.43
SMARCC1Q92922 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SMARCC1Q92922 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.01■■□□□ 1.43
SMARCC1Q92922 KRT8P32-201ENST00000512863 1461 ntBASIC24■■□□□ 1.43
SMARCC1Q92922 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC1Q92922 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC1Q92922 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SMARCC1Q92922 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms