Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS1Q92902 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.17■□□□□ 0.34
HPS1Q92902 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS1Q92902 RPS2P52-201ENST00000469610 820 ntBASIC17.17■□□□□ 0.34
HPS1Q92902 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.17■□□□□ 0.34
HPS1Q92902 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS1Q92902 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS1Q92902 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 AC142381.4-202ENST00000563973 229 ntBASIC17.17■□□□□ 0.34
HPS1Q92902 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HPS1Q92902 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HPS1Q92902 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS1Q92902 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.17■□□□□ 0.34
HPS1Q92902 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.17■□□□□ 0.34
HPS1Q92902 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
HPS1Q92902 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HPS1Q92902 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS1Q92902 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.17■□□□□ 0.34
HPS1Q92902 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.16■□□□□ 0.34
HPS1Q92902 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HPS1Q92902 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HPS1Q92902 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.16■□□□□ 0.34
HPS1Q92902 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.16■□□□□ 0.34
HPS1Q92902 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.16■□□□□ 0.34
HPS1Q92902 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.16■□□□□ 0.34
HPS1Q92902 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.16■□□□□ 0.34
HPS1Q92902 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.16■□□□□ 0.34
HPS1Q92902 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HPS1Q92902 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.16■□□□□ 0.34
HPS1Q92902 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HPS1Q92902 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 KRT8P36-201ENST00000489121 1440 ntBASIC17.15■□□□□ 0.34
HPS1Q92902 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HPS1Q92902 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HPS1Q92902 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.15■□□□□ 0.34
HPS1Q92902 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HPS1Q92902 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.15■□□□□ 0.34
HPS1Q92902 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.15■□□□□ 0.34
HPS1Q92902 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.15■□□□□ 0.34
HPS1Q92902 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.15■□□□□ 0.34
HPS1Q92902 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
HPS1Q92902 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HPS1Q92902 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.15■□□□□ 0.34
HPS1Q92902 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HPS1Q92902 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
HPS1Q92902 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms