Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AP005212.1-201ENST00000581547 1997 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 KRT18P16-201ENST00000510337 1294 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 DFFB-212ENST00000625756 649 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AL512604.3-201ENST00000569583 964 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 CLEC4GP1-201ENST00000596555 870 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AC008894.3-201ENST00000624324 3103 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 KRT8P41-201ENST00000533985 1514 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 CD37-204ENST00000535669 1674 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 Telomerase-vert.1-201ENST00000363312 438 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 BX119927.1-201ENST00000636596 1552 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 CES3-203ENST00000543856 3178 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 PCED1CP-201ENST00000419887 785 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 AL121956.5-201ENST00000625261 221 ntBASIC5.8□□□□□ -1.48
SYNE1Q8NF91 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE1Q8NF91 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE1Q8NF91 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms