Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 KRT18P57-201ENST00000443599 1254 ntBASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 BX323043.1-201ENST00000641006 1765 ntBASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 MIR564-202ENST00000385049 94 ntBASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 MTMR9LP-203ENST00000426597 1545 ntBASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAM1L1Q8N609 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.58■□□□□ 0.57
TRAM1L1Q8N609 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 BX664615.1-201ENST00000443558 458 ntBASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 AC009947.2-201ENST00000444014 672 ntBASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 FAM210CP-201ENST00000445714 574 ntBASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 NEK4P2-201ENST00000580004 1012 ntBASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAM1L1Q8N609 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 AP000523.1-201ENST00000398242 1049 ntBASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 KRT18P21-201ENST00000515767 1272 ntBASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 RN7SL850P-201ENST00000579959 291 ntBASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRAM1L1Q8N609 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms