Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.37■□□□□ 0.37
C9orf40Q8IXQ3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 AP000974.1-201ENST00000623909 2387 ntBASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 AC006011.2-201ENST00000621313 1158 ntBASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C9orf40Q8IXQ3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.35■□□□□ 0.37
C9orf40Q8IXQ3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 BX664615.1-201ENST00000443558 458 ntBASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C9orf40Q8IXQ3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms