Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AF238378.1-201ENST00000526806 358 ntBASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 POLD2P1-201ENST00000511220 997 ntBASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AL390719.2-201ENST00000606993 987 ntBASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 Z83836.1-201ENST00000624605 1642 ntBASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 AC005332.3-201ENST00000589904 676 ntBASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 AP001160.2-201ENST00000596071 487 ntBASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13BQ7Z7G8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AL035633.1-201ENST00000406139 838 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AL031284.1-201ENST00000419297 478 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 PMS2P2-201ENST00000425039 1128 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AC074051.2-201ENST00000565115 352 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 GOLGA2P11-201ENST00000562660 1621 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 RNF126P1-202ENST00000569893 925 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 MIR7706-201ENST00000613747 67 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms