Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD2Q7Z408 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 HLA-J-203ENST00000494367 1087 ntBASIC15.86■□□□□ 0.13
CSMD2Q7Z408 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD2Q7Z408 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 AC008556.1-201ENST00000610908 2040 ntBASIC15.85■□□□□ 0.13
CSMD2Q7Z408 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD2Q7Z408 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 AP006288.1-201ENST00000446065 395 ntBASIC15.84■□□□□ 0.13
CSMD2Q7Z408 AC012640.2-201ENST00000561606 901 ntBASIC15.84■□□□□ 0.13
CSMD2Q7Z408 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 HTR5BP-201ENST00000430851 1154 ntBASIC15.84■□□□□ 0.13
CSMD2Q7Z408 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 ZNF259P1-201ENST00000407656 1365 ntBASIC15.84■□□□□ 0.13
CSMD2Q7Z408 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CSMD2Q7Z408 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD2Q7Z408 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD2Q7Z408 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD2Q7Z408 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.83■□□□□ 0.13
CSMD2Q7Z408 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD2Q7Z408 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.83■□□□□ 0.13
CSMD2Q7Z408 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 AC093909.1-201ENST00000504731 1122 ntBASIC15.83■□□□□ 0.12
CSMD2Q7Z408 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 AC079834.2-201ENST00000609776 1949 ntBASIC15.83■□□□□ 0.12
CSMD2Q7Z408 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 YBX2P1-201ENST00000394192 760 ntBASIC15.83■□□□□ 0.12
CSMD2Q7Z408 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 KRT18P23-201ENST00000435622 1283 ntBASIC15.83■□□□□ 0.12
CSMD2Q7Z408 AC096582.2-201ENST00000510860 516 ntBASIC15.83■□□□□ 0.12
CSMD2Q7Z408 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 AC145285.3-201ENST00000564603 959 ntBASIC15.83■□□□□ 0.12
CSMD2Q7Z408 FAM197Y3-203ENST00000618346 717 ntBASIC15.83■□□□□ 0.12
CSMD2Q7Z408 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CSMD2Q7Z408 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms