Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 STARP1-201ENST00000397973 869 ntBASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 SLC25A24-204ENST00000569674 2357 ntBASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
SWSAP1Q6NVH7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 AL671277.2-201ENST00000458060 996 ntBASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SWSAP1Q6NVH7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 SPDYE15P-201ENST00000424157 909 ntBASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 AC112907.2-201ENST00000448639 330 ntBASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SWSAP1Q6NVH7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 MIR564-202ENST00000385049 94 ntBASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 AC112497.1-201ENST00000624824 639 ntBASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 AL358472.4-201ENST00000633140 710 ntBASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 AC068587.9-201ENST00000641814 219 ntBASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
SWSAP1Q6NVH7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 SEC1P-202ENST00000473944 940 ntBASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 HYMAI.1-201ENST00000620949 238 ntBASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.92■□□□□ 0.94
SWSAP1Q6NVH7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms