Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 MIR4758-201ENST00000577688 71 ntBASIC18.12■□□□□ 0.49
RNF220Q5VTB9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.12■□□□□ 0.49
RNF220Q5VTB9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF220Q5VTB9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 MYC-209ENST00000641252 345 ntBASIC18.11■□□□□ 0.49
RNF220Q5VTB9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 AC008764.6-201ENST00000595909 2069 ntBASIC18.11■□□□□ 0.49
RNF220Q5VTB9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF220Q5VTB9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.1■□□□□ 0.49
RNF220Q5VTB9 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.1■□□□□ 0.49
RNF220Q5VTB9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 AC126763.1-201ENST00000552015 2118 ntBASIC18.1■□□□□ 0.49
RNF220Q5VTB9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF220Q5VTB9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 Z98044.1-201ENST00000632503 1764 ntBASIC18.09■□□□□ 0.49
RNF220Q5VTB9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms