Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 KRT18P41-201ENST00000518924 1277 ntBASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13DQ5THJ4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13DQ5THJ4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.65□□□□□ -0.39
VPS13DQ5THJ4 IGHV3-41-201ENST00000613121 348 ntBASIC12.65□□□□□ -0.39
VPS13DQ5THJ4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13DQ5THJ4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 KRT8P7-201ENST00000533003 1432 ntBASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 RN7SL606P-201ENST00000472779 293 ntBASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 KRT18P13-201ENST00000400056 1290 ntBASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 Z82202.1-201ENST00000623446 1880 ntBASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13DQ5THJ4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 POM121L3P-201ENST00000419331 1163 ntBASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 PGAM5P1-201ENST00000518923 814 ntBASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 MIR5100-201ENST00000579544 119 ntBASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 MIR7706-201ENST00000613747 67 ntBASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13DQ5THJ4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms