Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC10.28□□□□□ -0.76
UBR4Q5T4S7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBR4Q5T4S7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 MIR6787-201ENST00000616675 61 ntBASIC10.27□□□□□ -0.77
UBR4Q5T4S7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 AC010336.2-201ENST00000564226 506 ntBASIC10.27□□□□□ -0.77
UBR4Q5T4S7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 TFAMP1-201ENST00000412727 736 ntBASIC10.27□□□□□ -0.77
UBR4Q5T4S7 DDT-206ENST00000430101 573 ntTSL 2 BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 AL596325.1-201ENST00000563991 1082 ntBASIC10.27□□□□□ -0.77
UBR4Q5T4S7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC10.27□□□□□ -0.77
UBR4Q5T4S7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 H19-201ENST00000411754 1788 ntTSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 AC108751.1-201ENST00000490852 363 ntBASIC10.26□□□□□ -0.77
UBR4Q5T4S7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 RN7SL606P-201ENST00000472779 293 ntBASIC10.26□□□□□ -0.77
UBR4Q5T4S7 FAM8A2P-201ENST00000528813 1142 ntBASIC10.26□□□□□ -0.77
UBR4Q5T4S7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 GRAMD4P1-201ENST00000435181 1110 ntBASIC10.26□□□□□ -0.77
UBR4Q5T4S7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 AC015911.4-201ENST00000588022 1070 ntBASIC10.26□□□□□ -0.77
UBR4Q5T4S7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 KRT8P11-201ENST00000409686 1436 ntBASIC10.26□□□□□ -0.77
UBR4Q5T4S7 LINC01126-201ENST00000623515 1646 ntBASIC10.26□□□□□ -0.77
UBR4Q5T4S7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
UBR4Q5T4S7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms