Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM71Q2Q1W2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 AP000347.1-202ENST00000435868 847 ntBASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 LINC00265-3P-201ENST00000447588 903 ntBASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 EMBP1-201ENST00000458200 901 ntBASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 AC104692.2-201ENST00000603054 253 ntBASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 AL390719.2-201ENST00000606993 987 ntBASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 Z83836.1-201ENST00000624605 1642 ntBASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 AC125437.2-201ENST00000625180 2167 ntBASIC20.52■□□□□ 0.88
TRIM71Q2Q1W2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
TRIM71Q2Q1W2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM71Q2Q1W2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM71Q2Q1W2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.52■□□□□ 0.87
TRIM71Q2Q1W2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 TOB2P1-201ENST00000469761 992 ntBASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 AP000867.3-201ENST00000524675 377 ntBASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 AC005332.3-201ENST00000589904 676 ntBASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM71Q2Q1W2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 AC009078.2-202ENST00000463353 338 ntBASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 AC012615.1-201ENST00000565797 1299 ntBASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 FEM1AP3-201ENST00000403722 1741 ntBASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM71Q2Q1W2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 AL031008.1-201ENST00000619963 541 ntBASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM71Q2Q1W2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms