Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1EQ15878 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1EQ15878 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1EQ15878 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.3■□□□□ 0.52
CACNA1EQ15878 AL121772.3-201ENST00000610840 674 ntBASIC18.3■□□□□ 0.52
CACNA1EQ15878 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1EQ15878 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1EQ15878 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1EQ15878 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CACNA1EQ15878 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 AL773604.1-201ENST00000617417 272 ntBASIC18.29■□□□□ 0.52
CACNA1EQ15878 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.29■□□□□ 0.52
CACNA1EQ15878 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 IGHV3-47-201ENST00000425060 335 ntBASIC18.29■□□□□ 0.52
CACNA1EQ15878 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 AC090616.6-201ENST00000582640 721 ntBASIC18.29■□□□□ 0.52
CACNA1EQ15878 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 AL592071.1-201ENST00000611956 408 ntBASIC18.29■□□□□ 0.52
CACNA1EQ15878 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1EQ15878 KRT89P-201ENST00000620027 1478 ntBASIC18.29■□□□□ 0.52
CACNA1EQ15878 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1EQ15878 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1EQ15878 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 AC091607.1-201ENST00000490318 1060 ntBASIC18.28■□□□□ 0.52
CACNA1EQ15878 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 AC034236.2-201ENST00000606662 1610 ntBASIC18.28■□□□□ 0.52
CACNA1EQ15878 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 FOSL1P1-201ENST00000511041 816 ntBASIC18.28■□□□□ 0.52
CACNA1EQ15878 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CACNA1EQ15878 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1EQ15878 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1EQ15878 AC008556.1-201ENST00000610908 2040 ntBASIC18.28■□□□□ 0.52
CACNA1EQ15878 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1EQ15878 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 MIR574-201ENST00000385209 96 ntBASIC18.27■□□□□ 0.52
CACNA1EQ15878 IGHGP-201ENST00000390555 1178 ntBASIC18.27■□□□□ 0.52
CACNA1EQ15878 KRT18P13-201ENST00000400056 1290 ntBASIC18.27■□□□□ 0.52
CACNA1EQ15878 AC079776.4-201ENST00000511039 504 ntBASIC18.27■□□□□ 0.52
CACNA1EQ15878 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 AL353801.3-201ENST00000609898 542 ntBASIC18.27■□□□□ 0.52
CACNA1EQ15878 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CACNA1EQ15878 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1EQ15878 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1EQ15878 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1EQ15878 AL590627.1-203ENST00000421194 1026 ntBASIC18.27■□□□□ 0.51
CACNA1EQ15878 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms