Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GPC3P51654 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.78■□□□□ 0.92
GPC3P51654 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.78■□□□□ 0.92
GPC3P51654 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.78■□□□□ 0.92
GPC3P51654 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.78■□□□□ 0.92
GPC3P51654 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.78■□□□□ 0.92
GPC3P51654 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
GPC3P51654 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.78■□□□□ 0.92
GPC3P51654 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GPC3P51654 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC3P51654 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.77■□□□□ 0.92
GPC3P51654 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC3P51654 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC3P51654 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC3P51654 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GPC3P51654 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.77■□□□□ 0.92
GPC3P51654 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC3P51654 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GPC3P51654 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
GPC3P51654 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.77■□□□□ 0.92
GPC3P51654 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC3P51654 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.77■□□□□ 0.92
GPC3P51654 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC3P51654 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.77■□□□□ 0.92
GPC3P51654 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC3P51654 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC3P51654 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GPC3P51654 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 AC036111.1-201ENST00000533973 1582 ntBASIC20.76■□□□□ 0.91
GPC3P51654 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
GPC3P51654 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.76■□□□□ 0.91
GPC3P51654 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 AL671277.2-201ENST00000458060 996 ntBASIC20.76■□□□□ 0.91
GPC3P51654 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.76■□□□□ 0.91
GPC3P51654 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.76■□□□□ 0.91
GPC3P51654 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
GPC3P51654 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.76■□□□□ 0.91
GPC3P51654 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.76■□□□□ 0.91
GPC3P51654 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
GPC3P51654 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GPC3P51654 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC3P51654 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.76■□□□□ 0.91
GPC3P51654 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GPC3P51654 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.75■□□□□ 0.91
GPC3P51654 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 BX323043.1-201ENST00000641006 1765 ntBASIC20.75■□□□□ 0.91
GPC3P51654 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 MCCD1P1-208ENST00000445732 328 ntBASIC20.75■□□□□ 0.91
GPC3P51654 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.75■□□□□ 0.91
GPC3P51654 AL121956.5-201ENST00000625261 221 ntBASIC20.75■□□□□ 0.91
GPC3P51654 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.75■□□□□ 0.91
GPC3P51654 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC3P51654 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.74■□□□□ 0.91
GPC3P51654 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC3P51654 STARP1-201ENST00000397973 869 ntBASIC20.74■□□□□ 0.91
GPC3P51654 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms