Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.76■□□□□ 0.91
RFC5P40937 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC5P40937 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RFC5P40937 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.76■□□□□ 0.91
RFC5P40937 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC5P40937 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC5P40937 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC5P40937 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RFC5P40937 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.75■□□□□ 0.91
RFC5P40937 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.75■□□□□ 0.91
RFC5P40937 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC5P40937 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC5P40937 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.75■□□□□ 0.91
RFC5P40937 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RFC5P40937 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RFC5P40937 AC112497.1-201ENST00000624824 639 ntBASIC20.75■□□□□ 0.91
RFC5P40937 MYC-208ENST00000641036 567 ntBASIC20.75■□□□□ 0.91
RFC5P40937 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC5P40937 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC5P40937 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC5P40937 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
RFC5P40937 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RFC5P40937 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.74■□□□□ 0.91
RFC5P40937 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.74■□□□□ 0.91
RFC5P40937 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.74■□□□□ 0.91
RFC5P40937 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFC5P40937 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFC5P40937 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC5P40937 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.74■□□□□ 0.91
RFC5P40937 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC5P40937 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC5P40937 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.74■□□□□ 0.91
RFC5P40937 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
RFC5P40937 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC5P40937 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RFC5P40937 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
RFC5P40937 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.74■□□□□ 0.91
RFC5P40937 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC5P40937 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFC5P40937 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RFC5P40937 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.73■□□□□ 0.91
RFC5P40937 KRT8P7-201ENST00000533003 1432 ntBASIC20.73■□□□□ 0.91
RFC5P40937 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RFC5P40937 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 STARP1-201ENST00000397973 869 ntBASIC20.73■□□□□ 0.91
RFC5P40937 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.73■□□□□ 0.91
RFC5P40937 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.73■□□□□ 0.91
RFC5P40937 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC5P40937 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC5P40937 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms