Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.87■□□□□ 0.77
CHKAP35790 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHKAP35790 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.87■□□□□ 0.77
CHKAP35790 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHKAP35790 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHKAP35790 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHKAP35790 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHKAP35790 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHKAP35790 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHKAP35790 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.87■□□□□ 0.77
CHKAP35790 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.86■□□□□ 0.77
CHKAP35790 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHKAP35790 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHKAP35790 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.86■□□□□ 0.77
CHKAP35790 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.86■□□□□ 0.77
CHKAP35790 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHKAP35790 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.86■□□□□ 0.77
CHKAP35790 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 AC113347.1-201ENST00000413321 391 ntBASIC19.86■□□□□ 0.77
CHKAP35790 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.86■□□□□ 0.77
CHKAP35790 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.86■□□□□ 0.77
CHKAP35790 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.86■□□□□ 0.77
CHKAP35790 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
CHKAP35790 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.86■□□□□ 0.77
CHKAP35790 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 AC092865.7-201ENST00000641832 219 ntBASIC19.86■□□□□ 0.77
CHKAP35790 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.86■□□□□ 0.77
CHKAP35790 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.86■□□□□ 0.77
CHKAP35790 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHKAP35790 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHKAP35790 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHKAP35790 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
CHKAP35790 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 SLC25A1P2-201ENST00000430693 912 ntBASIC19.85■□□□□ 0.77
CHKAP35790 SLC25A3P1-201ENST00000443844 931 ntBASIC19.85■□□□□ 0.77
CHKAP35790 CCR12P-201ENST00000446203 998 ntBASIC19.85■□□□□ 0.77
CHKAP35790 AC116562.4-202ENST00000641738 218 ntBASIC19.85■□□□□ 0.77
CHKAP35790 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHKAP35790 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHKAP35790 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHKAP35790 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.85■□□□□ 0.77
CHKAP35790 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHKAP35790 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.84■□□□□ 0.77
CHKAP35790 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.84■□□□□ 0.77
CHKAP35790 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.84■□□□□ 0.77
CHKAP35790 AL137013.1-201ENST00000432946 1228 ntBASIC19.84■□□□□ 0.77
CHKAP35790 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.84■□□□□ 0.77
CHKAP35790 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.84■□□□□ 0.77
CHKAP35790 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.84■□□□□ 0.77
CHKAP35790 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 AC026471.1-201ENST00000564629 3026 ntBASIC19.84■□□□□ 0.77
CHKAP35790 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHKAP35790 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.84■□□□□ 0.77
CHKAP35790 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 ZNF815P-204ENST00000434898 1737 ntBASIC19.84■□□□□ 0.77
CHKAP35790 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.84■□□□□ 0.77
CHKAP35790 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHKAP35790 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.84■□□□□ 0.77
CHKAP35790 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHKAP35790 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.84■□□□□ 0.77
CHKAP35790 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHKAP35790 AC005082.1-201ENST00000413042 2259 ntBASIC19.83■□□□□ 0.77
CHKAP35790 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms