Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.64■■□□□ 1.38
RFC4P35249 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFC4P35249 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.64■■□□□ 1.38
RFC4P35249 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFC4P35249 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFC4P35249 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.64■■□□□ 1.38
RFC4P35249 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFC4P35249 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFC4P35249 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFC4P35249 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFC4P35249 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFC4P35249 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.37
RFC4P35249 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RFC4P35249 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFC4P35249 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RFC4P35249 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.64■■□□□ 1.37
RFC4P35249 AC064862.7-201ENST00000604520 867 ntBASIC23.64■■□□□ 1.37
RFC4P35249 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.64■■□□□ 1.37
RFC4P35249 REXO1L6P-202ENST00000619970 1078 ntBASIC23.64■■□□□ 1.37
RFC4P35249 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.64■■□□□ 1.37
RFC4P35249 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.64■■□□□ 1.37
RFC4P35249 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.64■■□□□ 1.37
RFC4P35249 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.64■■□□□ 1.37
RFC4P35249 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFC4P35249 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.64■■□□□ 1.37
RFC4P35249 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFC4P35249 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RFC4P35249 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFC4P35249 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RFC4P35249 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.63■■□□□ 1.37
RFC4P35249 MIR564-202ENST00000385049 94 ntBASIC23.63■■□□□ 1.37
RFC4P35249 IGHGP-201ENST00000390555 1178 ntBASIC23.63■■□□□ 1.37
RFC4P35249 PMS2P1-201ENST00000431037 1228 ntBASIC23.63■■□□□ 1.37
RFC4P35249 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFC4P35249 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
RFC4P35249 AF238378.1-201ENST00000526806 358 ntBASIC23.63■■□□□ 1.37
RFC4P35249 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.63■■□□□ 1.37
RFC4P35249 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.63■■□□□ 1.37
RFC4P35249 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFC4P35249 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.63■■□□□ 1.37
RFC4P35249 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.63■■□□□ 1.37
RFC4P35249 NSUN5P1-202ENST00000421140 1535 ntBASIC23.63■■□□□ 1.37
RFC4P35249 NSUN5P2-203ENST00000457352 1529 ntBASIC23.63■■□□□ 1.37
RFC4P35249 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFC4P35249 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFC4P35249 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.63■■□□□ 1.37
RFC4P35249 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.63■■□□□ 1.37
RFC4P35249 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.63■■□□□ 1.37
RFC4P35249 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.62■■□□□ 1.37
RFC4P35249 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RFC4P35249 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RFC4P35249 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
RFC4P35249 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.62■■□□□ 1.37
RFC4P35249 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.62■■□□□ 1.37
RFC4P35249 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RFC4P35249 RN7SL606P-201ENST00000472779 293 ntBASIC23.62■■□□□ 1.37
RFC4P35249 VENTXP7-201ENST00000475503 772 ntBASIC23.62■■□□□ 1.37
RFC4P35249 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.62■■□□□ 1.37
RFC4P35249 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.62■■□□□ 1.37
RFC4P35249 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.62■■□□□ 1.37
RFC4P35249 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.62■■□□□ 1.37
RFC4P35249 TCF3P1-201ENST00000423021 1937 ntBASIC23.62■■□□□ 1.37
RFC4P35249 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFC4P35249 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.61■■□□□ 1.37
RFC4P35249 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
RFC4P35249 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFC4P35249 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFC4P35249 MIR574-201ENST00000385209 96 ntBASIC23.61■■□□□ 1.37
RFC4P35249 NUS1P2-201ENST00000417358 873 ntBASIC23.61■■□□□ 1.37
RFC4P35249 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RFC4P35249 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.61■■□□□ 1.37
RFC4P35249 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.61■■□□□ 1.37
RFC4P35249 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RFC4P35249 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.61■■□□□ 1.37
RFC4P35249 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.61■■□□□ 1.37
RFC4P35249 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.61■■□□□ 1.37
RFC4P35249 AP001005.1-201ENST00000571755 1248 ntBASIC23.61■■□□□ 1.37
RFC4P35249 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.61■■□□□ 1.37
RFC4P35249 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RFC4P35249 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFC4P35249 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RFC4P35249 AC092667.1-201ENST00000434301 2586 ntBASIC23.6■■□□□ 1.37
RFC4P35249 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.6■■□□□ 1.37
RFC4P35249 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFC4P35249 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.6■■□□□ 1.37
RFC4P35249 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFC4P35249 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFC4P35249 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFC4P35249 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms