Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
RPA3P35244 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RPA3P35244 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.04■□□□□ 0.64
RPA3P35244 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.04■□□□□ 0.64
RPA3P35244 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPA3P35244 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.04■□□□□ 0.64
RPA3P35244 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPA3P35244 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.03■□□□□ 0.64
RPA3P35244 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPA3P35244 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPA3P35244 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.03■□□□□ 0.64
RPA3P35244 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.03■□□□□ 0.64
RPA3P35244 ABHD17AP1-201ENST00000358206 933 ntBASIC19.03■□□□□ 0.64
RPA3P35244 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.03■□□□□ 0.64
RPA3P35244 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.03■□□□□ 0.64
RPA3P35244 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.03■□□□□ 0.64
RPA3P35244 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RPA3P35244 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RPA3P35244 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.03■□□□□ 0.64
RPA3P35244 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPA3P35244 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.02■□□□□ 0.64
RPA3P35244 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RPA3P35244 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RPA3P35244 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
RPA3P35244 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.02■□□□□ 0.64
RPA3P35244 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
RPA3P35244 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RPA3P35244 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.02■□□□□ 0.64
RPA3P35244 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RPA3P35244 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.02■□□□□ 0.64
RPA3P35244 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RPA3P35244 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.02■□□□□ 0.64
RPA3P35244 AC239809.2-201ENST00000415381 517 ntBASIC19.02■□□□□ 0.64
RPA3P35244 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
RPA3P35244 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.02■□□□□ 0.64
RPA3P35244 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.02■□□□□ 0.64
RPA3P35244 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RPA3P35244 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.02■□□□□ 0.64
RPA3P35244 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPA3P35244 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.02■□□□□ 0.63
RPA3P35244 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.02■□□□□ 0.63
RPA3P35244 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.02■□□□□ 0.63
RPA3P35244 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
RPA3P35244 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPA3P35244 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 AC126763.1-201ENST00000552015 2118 ntBASIC19.01■□□□□ 0.63
RPA3P35244 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPA3P35244 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPA3P35244 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.01■□□□□ 0.63
RPA3P35244 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 RN7SL471P-201ENST00000580476 299 ntBASIC19.01■□□□□ 0.63
RPA3P35244 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.01■□□□□ 0.63
RPA3P35244 AL023875.1-201ENST00000640777 796 ntBASIC19.01■□□□□ 0.63
RPA3P35244 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPA3P35244 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19■□□□□ 0.63
RPA3P35244 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19■□□□□ 0.63
RPA3P35244 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPA3P35244 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms