Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COL8A2P25067 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 KRT8P3-201ENST00000519669 1449 ntBASIC15.89■□□□□ 0.13
COL8A2P25067 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
COL8A2P25067 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.89■□□□□ 0.13
COL8A2P25067 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.89■□□□□ 0.13
COL8A2P25067 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.89■□□□□ 0.13
COL8A2P25067 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
COL8A2P25067 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL8A2P25067 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.89■□□□□ 0.13
COL8A2P25067 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.88■□□□□ 0.13
COL8A2P25067 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.88■□□□□ 0.13
COL8A2P25067 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.88■□□□□ 0.13
COL8A2P25067 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.88■□□□□ 0.13
COL8A2P25067 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
COL8A2P25067 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 AL031133.1-201ENST00000406807 723 ntBASIC15.88■□□□□ 0.13
COL8A2P25067 AL359075.1-203ENST00000462729 1002 ntBASIC15.88■□□□□ 0.13
COL8A2P25067 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.88■□□□□ 0.13
COL8A2P25067 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.88■□□□□ 0.13
COL8A2P25067 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
COL8A2P25067 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
COL8A2P25067 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL8A2P25067 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.87■□□□□ 0.13
COL8A2P25067 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.87■□□□□ 0.13
COL8A2P25067 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.87■□□□□ 0.13
COL8A2P25067 HOMER2P1-201ENST00000455653 964 ntBASIC15.87■□□□□ 0.13
COL8A2P25067 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.87■□□□□ 0.13
COL8A2P25067 GCSHP2-201ENST00000560971 527 ntBASIC15.87■□□□□ 0.13
COL8A2P25067 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.87■□□□□ 0.13
COL8A2P25067 NEK4P2-201ENST00000580004 1012 ntBASIC15.87■□□□□ 0.13
COL8A2P25067 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL8A2P25067 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms