Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
ERCC2P18074 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC2P18074 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.37■□□□□ 0.69
ERCC2P18074 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC2P18074 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.36■□□□□ 0.69
ERCC2P18074 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC2P18074 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.36■□□□□ 0.69
ERCC2P18074 C2orf69P3-201ENST00000565542 1120 ntBASIC19.36■□□□□ 0.69
ERCC2P18074 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.36■□□□□ 0.69
ERCC2P18074 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.36■□□□□ 0.69
ERCC2P18074 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.36■□□□□ 0.69
ERCC2P18074 GPAT2P1-201ENST00000444924 1672 ntBASIC19.36■□□□□ 0.69
ERCC2P18074 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC2P18074 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC2P18074 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ERCC2P18074 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ERCC2P18074 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ERCC2P18074 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
ERCC2P18074 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 AL023284.2-201ENST00000405850 579 ntBASIC19.35■□□□□ 0.69
ERCC2P18074 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
ERCC2P18074 BX088651.1-201ENST00000540551 451 ntBASIC19.35■□□□□ 0.69
ERCC2P18074 AL353719.1-201ENST00000566847 864 ntBASIC19.35■□□□□ 0.69
ERCC2P18074 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.35■□□□□ 0.69
ERCC2P18074 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.35■□□□□ 0.69
ERCC2P18074 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.35■□□□□ 0.69
ERCC2P18074 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC2P18074 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC2P18074 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ERCC2P18074 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC2P18074 ANO7L1-203ENST00000602586 1720 ntBASIC19.34■□□□□ 0.69
ERCC2P18074 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ERCC2P18074 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
ERCC2P18074 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.34■□□□□ 0.69
ERCC2P18074 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC2P18074 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC2P18074 AC010947.1-201ENST00000623454 693 ntBASIC19.34■□□□□ 0.69
ERCC2P18074 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC2P18074 AL138781.2-201ENST00000617896 1843 ntBASIC19.34■□□□□ 0.69
ERCC2P18074 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC2P18074 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ERCC2P18074 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC2P18074 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC2P18074 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC2P18074 AC092338.2-201ENST00000568827 1415 ntBASIC19.34■□□□□ 0.69
ERCC2P18074 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC2P18074 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
ERCC2P18074 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ERCC2P18074 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC2P18074 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC2P18074 TSPY14P-201ENST00000303979 915 ntBASIC19.33■□□□□ 0.68
ERCC2P18074 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC2P18074 CCR12P-201ENST00000446203 998 ntBASIC19.33■□□□□ 0.68
ERCC2P18074 TSPY17P-201ENST00000450329 467 ntBASIC19.33■□□□□ 0.68
ERCC2P18074 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC2P18074 MIR4674-201ENST00000582457 87 ntBASIC19.33■□□□□ 0.68
ERCC2P18074 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ERCC2P18074 AC008556.1-201ENST00000610908 2040 ntBASIC19.33■□□□□ 0.68
ERCC2P18074 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC2P18074 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms