Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PF4V1P10720 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PF4V1P10720 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.92□□□□□ -0.02
PF4V1P10720 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 KRT8P11-201ENST00000409686 1436 ntBASIC14.92□□□□□ -0.02
PF4V1P10720 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 PRSS44-201ENST00000515154 1146 ntBASIC14.92□□□□□ -0.02
PF4V1P10720 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
PF4V1P10720 NTF6B-201ENST00000591913 560 ntBASIC14.92□□□□□ -0.02
PF4V1P10720 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.92□□□□□ -0.02
PF4V1P10720 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.92□□□□□ -0.02
PF4V1P10720 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.92□□□□□ -0.02
PF4V1P10720 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PF4V1P10720 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
PF4V1P10720 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 AL032819.2-201ENST00000624543 2162 ntBASIC14.92□□□□□ -0.02
PF4V1P10720 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
PF4V1P10720 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.92□□□□□ -0.02
PF4V1P10720 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 AC073508.3-201ENST00000619697 1419 ntBASIC14.92□□□□□ -0.02
PF4V1P10720 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PF4V1P10720 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.92□□□□□ -0.02
PF4V1P10720 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PF4V1P10720 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.91□□□□□ -0.02
PF4V1P10720 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.91□□□□□ -0.02
PF4V1P10720 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.91□□□□□ -0.02
PF4V1P10720 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 AK4P3-201ENST00000418260 669 ntBASIC14.91□□□□□ -0.02
PF4V1P10720 SLC25A1P2-201ENST00000430693 912 ntBASIC14.91□□□□□ -0.02
PF4V1P10720 TSPY23P-201ENST00000440136 739 ntBASIC14.91□□□□□ -0.02
PF4V1P10720 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 BX664615.1-201ENST00000443558 458 ntBASIC14.91□□□□□ -0.02
PF4V1P10720 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.91□□□□□ -0.02
PF4V1P10720 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.91□□□□□ -0.02
PF4V1P10720 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PF4V1P10720 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.91□□□□□ -0.02
PF4V1P10720 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PF4V1P10720 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.9□□□□□ -0.02
PF4V1P10720 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PF4V1P10720 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PF4V1P10720 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PF4V1P10720 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.9□□□□□ -0.02
PF4V1P10720 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PF4V1P10720 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PF4V1P10720 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PF4V1P10720 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms