Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 AC069236.1-201ENST00000604339 616 ntBASIC16.27■□□□□ 0.2
HLA-DQB1P01920 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB1P01920 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.26■□□□□ 0.19
HLA-DQB1P01920 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB1P01920 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 AC016769.1-201ENST00000409132 1010 ntBASIC16.25■□□□□ 0.19
HLA-DQB1P01920 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 AC087623.3-201ENST00000607047 1098 ntBASIC16.25■□□□□ 0.19
HLA-DQB1P01920 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 AC008694.1-202ENST00000636953 945 ntBASIC16.25■□□□□ 0.19
HLA-DQB1P01920 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB1P01920 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms