Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 SLC25A3P1-201ENST00000443844 931 ntBASIC17.64■□□□□ 0.41
CTNSO60931 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.64■□□□□ 0.41
CTNSO60931 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
CTNSO60931 MIR4674-201ENST00000582457 87 ntBASIC17.64■□□□□ 0.41
CTNSO60931 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNSO60931 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNSO60931 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNSO60931 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNSO60931 HEIH-201ENST00000623091 1652 ntBASIC17.64■□□□□ 0.41
CTNSO60931 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNSO60931 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CTNSO60931 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNSO60931 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CTNSO60931 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNSO60931 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNSO60931 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.63■□□□□ 0.41
CTNSO60931 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CTNSO60931 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.63■□□□□ 0.41
CTNSO60931 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNSO60931 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CTNSO60931 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNSO60931 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.63■□□□□ 0.41
CTNSO60931 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNSO60931 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNSO60931 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNSO60931 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNSO60931 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.63■□□□□ 0.41
CTNSO60931 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTNSO60931 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNSO60931 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CTNSO60931 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTNSO60931 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNSO60931 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.63■□□□□ 0.41
CTNSO60931 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNSO60931 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNSO60931 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNSO60931 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTNSO60931 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTNSO60931 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.62■□□□□ 0.41
CTNSO60931 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CTNSO60931 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.62■□□□□ 0.41
CTNSO60931 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTNSO60931 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.62■□□□□ 0.41
CTNSO60931 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.62■□□□□ 0.41
CTNSO60931 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNSO60931 AC098818.2-201ENST00000564925 2320 ntBASIC17.62■□□□□ 0.41
CTNSO60931 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNSO60931 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CTNSO60931 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTNSO60931 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNSO60931 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 AP000974.1-201ENST00000623909 2387 ntBASIC17.61■□□□□ 0.41
CTNSO60931 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
CTNSO60931 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CTNSO60931 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CTNSO60931 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTNSO60931 WWOX-216ENST00000569818 525 ntBASIC17.61■□□□□ 0.41
CTNSO60931 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.61■□□□□ 0.41
CTNSO60931 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.61■□□□□ 0.41
CTNSO60931 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNSO60931 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNSO60931 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.61■□□□□ 0.41
CTNSO60931 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNSO60931 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms