Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.99■■□□□ 1.11
CTNND1O60716 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.99■■□□□ 1.11
CTNND1O60716 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.99■■□□□ 1.11
CTNND1O60716 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.99■■□□□ 1.11
CTNND1O60716 AC111152.3-201ENST00000569699 673 ntBASIC21.99■■□□□ 1.11
CTNND1O60716 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.99■■□□□ 1.11
CTNND1O60716 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.99■■□□□ 1.11
CTNND1O60716 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.99■■□□□ 1.11
CTNND1O60716 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.99■■□□□ 1.11
CTNND1O60716 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CTNND1O60716 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CTNND1O60716 RNF126P1-202ENST00000569893 925 ntBASIC21.98■■□□□ 1.11
CTNND1O60716 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
CTNND1O60716 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTNND1O60716 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.97■■□□□ 1.11
CTNND1O60716 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.97■■□□□ 1.11
CTNND1O60716 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.97■■□□□ 1.11
CTNND1O60716 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.97■■□□□ 1.11
CTNND1O60716 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.97■■□□□ 1.11
CTNND1O60716 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.97■■□□□ 1.11
CTNND1O60716 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 AC010240.3-201ENST00000607688 395 ntBASIC21.97■■□□□ 1.11
CTNND1O60716 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.97■■□□□ 1.11
CTNND1O60716 KRT18P1-202ENST00000452408 1331 ntBASIC21.97■■□□□ 1.11
CTNND1O60716 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.97■■□□□ 1.11
CTNND1O60716 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.97■■□□□ 1.11
CTNND1O60716 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
CTNND1O60716 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.97■■□□□ 1.11
CTNND1O60716 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CTNND1O60716 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.97■■□□□ 1.11
CTNND1O60716 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CTNND1O60716 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CTNND1O60716 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CTNND1O60716 MIR564-202ENST00000385049 94 ntBASIC21.96■■□□□ 1.11
CTNND1O60716 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.96■■□□□ 1.11
CTNND1O60716 AC246785.2-201ENST00000432512 513 ntBASIC21.96■■□□□ 1.11
CTNND1O60716 DRAXINP1-201ENST00000437611 948 ntBASIC21.96■■□□□ 1.11
CTNND1O60716 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.96■■□□□ 1.11
CTNND1O60716 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.96■■□□□ 1.11
CTNND1O60716 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.96■■□□□ 1.11
CTNND1O60716 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.96■■□□□ 1.11
CTNND1O60716 UNC93B7-201ENST00000509439 705 ntBASIC21.96■■□□□ 1.11
CTNND1O60716 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.96■■□□□ 1.11
CTNND1O60716 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.96■■□□□ 1.11
CTNND1O60716 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.96■■□□□ 1.11
CTNND1O60716 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CTNND1O60716 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CTNND1O60716 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTNND1O60716 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
CTNND1O60716 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CTNND1O60716 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.95■■□□□ 1.1
CTNND1O60716 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 AC004870.1-201ENST00000315132 882 ntBASIC21.95■■□□□ 1.1
CTNND1O60716 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms