Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PRKNO60260 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.51■□□□□ 0.39
PRKNO60260 AL138966.2-201ENST00000621997 464 ntBASIC17.51■□□□□ 0.39
PRKNO60260 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.51■□□□□ 0.39
PRKNO60260 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.51■□□□□ 0.39
PRKNO60260 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKNO60260 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.51■□□□□ 0.39
PRKNO60260 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKNO60260 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
PRKNO60260 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKNO60260 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.51■□□□□ 0.39
PRKNO60260 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.51■□□□□ 0.39
PRKNO60260 GPAT2P1-201ENST00000444924 1672 ntBASIC17.51■□□□□ 0.39
PRKNO60260 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PRKNO60260 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
PRKNO60260 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKNO60260 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKNO60260 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PRKNO60260 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PRKNO60260 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 KRT8P3-201ENST00000519669 1449 ntBASIC17.5■□□□□ 0.39
PRKNO60260 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 ATP5G1P1-201ENST00000448724 379 ntBASIC17.5■□□□□ 0.39
PRKNO60260 AC104076.2-201ENST00000448912 469 ntBASIC17.5■□□□□ 0.39
PRKNO60260 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.5■□□□□ 0.39
PRKNO60260 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.5■□□□□ 0.39
PRKNO60260 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.5■□□□□ 0.39
PRKNO60260 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.5■□□□□ 0.39
PRKNO60260 AC006011.2-201ENST00000621313 1158 ntBASIC17.5■□□□□ 0.39
PRKNO60260 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PRKNO60260 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.5■□□□□ 0.39
PRKNO60260 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PRKNO60260 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PRKNO60260 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.5■□□□□ 0.39
PRKNO60260 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKNO60260 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKNO60260 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PRKNO60260 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PRKNO60260 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKNO60260 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKNO60260 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PRKNO60260 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRKNO60260 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.49■□□□□ 0.39
PRKNO60260 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PRKNO60260 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRKNO60260 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRKNO60260 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKNO60260 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKNO60260 AC020763.4-201ENST00000623414 4170 ntBASIC17.48■□□□□ 0.39
PRKNO60260 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 AL023284.2-201ENST00000405850 579 ntBASIC17.48■□□□□ 0.39
PRKNO60260 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKNO60260 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKNO60260 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKNO60260 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRKNO60260 AC006333.2-201ENST00000607957 2099 ntBASIC17.48■□□□□ 0.39
PRKNO60260 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.47■□□□□ 0.39
PRKNO60260 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRKNO60260 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PRKNO60260 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKNO60260 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PRKNO60260 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRKNO60260 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKNO60260 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.47■□□□□ 0.39
PRKNO60260 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRKNO60260 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRKNO60260 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRKNO60260 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms