Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.55■□□□□ 0.72
MSI1O43347 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.55■□□□□ 0.72
MSI1O43347 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.55■□□□□ 0.72
MSI1O43347 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 KRT8P32-201ENST00000512863 1461 ntBASIC19.54■□□□□ 0.72
MSI1O43347 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.54■□□□□ 0.72
MSI1O43347 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 MIR1224-201ENST00000408193 85 ntBASIC19.54■□□□□ 0.72
MSI1O43347 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.54■□□□□ 0.72
MSI1O43347 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
MSI1O43347 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.54■□□□□ 0.72
MSI1O43347 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.54■□□□□ 0.72
MSI1O43347 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.54■□□□□ 0.72
MSI1O43347 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.54■□□□□ 0.72
MSI1O43347 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
MSI1O43347 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
MSI1O43347 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.54■□□□□ 0.72
MSI1O43347 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MSI1O43347 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSI1O43347 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.53■□□□□ 0.72
MSI1O43347 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
MSI1O43347 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
MSI1O43347 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MSI1O43347 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
MSI1O43347 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.53■□□□□ 0.72
MSI1O43347 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 BX664615.1-201ENST00000443558 458 ntBASIC19.53■□□□□ 0.72
MSI1O43347 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
MSI1O43347 AL512604.3-201ENST00000569583 964 ntBASIC19.53■□□□□ 0.72
MSI1O43347 AC010331.1-201ENST00000611423 582 ntBASIC19.53■□□□□ 0.72
MSI1O43347 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.53■□□□□ 0.72
MSI1O43347 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MSI1O43347 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.53■□□□□ 0.72
MSI1O43347 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSI1O43347 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSI1O43347 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSI1O43347 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSI1O43347 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.52■□□□□ 0.72
MSI1O43347 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MSI1O43347 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MSI1O43347 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MSI1O43347 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.52■□□□□ 0.72
MSI1O43347 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSI1O43347 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSI1O43347 DUX4L26-201ENST00000489078 1255 ntBASIC19.52■□□□□ 0.72
MSI1O43347 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.52■□□□□ 0.72
MSI1O43347 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
MSI1O43347 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.52■□□□□ 0.72
MSI1O43347 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.52■□□□□ 0.72
MSI1O43347 MIR3180-5-201ENST00000583743 153 ntBASIC19.52■□□□□ 0.72
MSI1O43347 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
MSI1O43347 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSI1O43347 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
MSI1O43347 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.52■□□□□ 0.72
MSI1O43347 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSI1O43347 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MSI1O43347 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MSI1O43347 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSI1O43347 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSI1O43347 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSI1O43347 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSI1O43347 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSI1O43347 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MSI1O43347 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.51■□□□□ 0.71
MSI1O43347 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.51■□□□□ 0.71
MSI1O43347 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.51■□□□□ 0.71
MSI1O43347 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.51■□□□□ 0.71
MSI1O43347 COX11P1-201ENST00000489116 835 ntBASIC19.51■□□□□ 0.71
MSI1O43347 YBX1P2-201ENST00000489612 999 ntBASIC19.51■□□□□ 0.71
MSI1O43347 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.51■□□□□ 0.71
MSI1O43347 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSI1O43347 AL049597.2-201ENST00000565575 961 ntBASIC19.51■□□□□ 0.71
MSI1O43347 WWOX-216ENST00000569818 525 ntBASIC19.51■□□□□ 0.71
MSI1O43347 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms