Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 MIR3180-5-201ENST00000583743 153 ntBASIC17.67■□□□□ 0.42
RRP8O43159 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.67■□□□□ 0.42
RRP8O43159 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
RRP8O43159 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RRP8O43159 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.66■□□□□ 0.42
RRP8O43159 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RRP8O43159 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RRP8O43159 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RRP8O43159 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 LINC00167-201ENST00000530583 1419 ntBASIC17.66■□□□□ 0.42
RRP8O43159 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RRP8O43159 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RRP8O43159 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RRP8O43159 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RRP8O43159 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RRP8O43159 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.66■□□□□ 0.42
RRP8O43159 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 SEC1P-202ENST00000473944 940 ntBASIC17.66■□□□□ 0.42
RRP8O43159 AC093909.1-201ENST00000504731 1122 ntBASIC17.66■□□□□ 0.42
RRP8O43159 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.66■□□□□ 0.42
RRP8O43159 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RRP8O43159 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.66■□□□□ 0.42
RRP8O43159 MIR3917-201ENST00000580971 93 ntBASIC17.66■□□□□ 0.42
RRP8O43159 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.66■□□□□ 0.42
RRP8O43159 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 GPAT2P1-201ENST00000444924 1672 ntBASIC17.66■□□□□ 0.42
RRP8O43159 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RRP8O43159 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RRP8O43159 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.66■□□□□ 0.42
RRP8O43159 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.66■□□□□ 0.42
RRP8O43159 Z83836.1-201ENST00000624605 1642 ntBASIC17.65■□□□□ 0.42
RRP8O43159 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RRP8O43159 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RRP8O43159 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RRP8O43159 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 MCCD1P1-208ENST00000445732 328 ntBASIC17.65■□□□□ 0.42
RRP8O43159 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.65■□□□□ 0.42
RRP8O43159 VENTXP7-201ENST00000475503 772 ntBASIC17.65■□□□□ 0.42
RRP8O43159 RNF126P1-202ENST00000569893 925 ntBASIC17.65■□□□□ 0.42
RRP8O43159 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.65■□□□□ 0.42
RRP8O43159 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.65■□□□□ 0.42
RRP8O43159 AL773604.1-201ENST00000617417 272 ntBASIC17.65■□□□□ 0.42
RRP8O43159 AP005212.1-201ENST00000581547 1997 ntBASIC17.65■□□□□ 0.42
RRP8O43159 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.65■□□□□ 0.42
RRP8O43159 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.65■□□□□ 0.42
RRP8O43159 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RRP8O43159 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RRP8O43159 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
RRP8O43159 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RRP8O43159 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
RRP8O43159 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
RRP8O43159 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.64■□□□□ 0.41
RRP8O43159 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.64■□□□□ 0.41
RRP8O43159 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.64■□□□□ 0.41
RRP8O43159 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RRP8O43159 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RRP8O43159 TSPY12P-201ENST00000421279 868 ntBASIC17.64■□□□□ 0.41
RRP8O43159 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RRP8O43159 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.64■□□□□ 0.41
RRP8O43159 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms