Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL162741.1-201ENST00000565563 1558 ntBASIC16.68■□□□□ 0.26
NPIPB4C9JG80 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.67■□□□□ 0.26
NPIPB4C9JG80 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC009113.1-201ENST00000570267 2443 ntBASIC16.67■□□□□ 0.26
NPIPB4C9JG80 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AP000593.1-201ENST00000393668 712 ntBASIC16.67■□□□□ 0.26
NPIPB4C9JG80 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AL023284.2-201ENST00000405850 579 ntBASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AP003071.4-201ENST00000562276 1284 ntBASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 AC008622.2-201ENST00000617006 1229 ntBASIC16.67■□□□□ 0.26
NPIPB4C9JG80 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPB4C9JG80 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 MIR564-202ENST00000385049 94 ntBASIC16.66■□□□□ 0.26
NPIPB4C9JG80 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 SLC25A1P2-201ENST00000430693 912 ntBASIC16.66■□□□□ 0.26
NPIPB4C9JG80 MCCD1P1-208ENST00000445732 328 ntBASIC16.66■□□□□ 0.26
NPIPB4C9JG80 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NPIPB4C9JG80 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 UNC93B2-201ENST00000285383 730 ntBASIC16.65■□□□□ 0.26
NPIPB4C9JG80 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 AP006294.2-201ENST00000641667 209 ntBASIC16.65■□□□□ 0.26
NPIPB4C9JG80 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms