Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCHNA4D1U4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCHNA4D1U4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCHNA4D1U4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCHNA4D1U4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 AC005332.3-201ENST00000589904 676 ntBASIC20.18■□□□□ 0.82
LCHNA4D1U4 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 AC099336.1-202ENST00000602961 463 ntBASIC20.18■□□□□ 0.82
LCHNA4D1U4 BX640515.1-201ENST00000617215 977 ntBASIC20.18■□□□□ 0.82
LCHNA4D1U4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCHNA4D1U4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.18■□□□□ 0.82
LCHNA4D1U4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCHNA4D1U4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCHNA4D1U4 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.18■□□□□ 0.82
LCHNA4D1U4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 AL590627.1-203ENST00000421194 1026 ntBASIC20.17■□□□□ 0.82
LCHNA4D1U4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 AC233702.3-201ENST00000578656 1387 ntBASIC20.17■□□□□ 0.82
LCHNA4D1U4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.17■□□□□ 0.82
LCHNA4D1U4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCHNA4D1U4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 SLC25A24-204ENST00000569674 2357 ntBASIC20.16■□□□□ 0.82
LCHNA4D1U4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 AL390719.2-201ENST00000606993 987 ntBASIC20.16■□□□□ 0.82
LCHNA4D1U4 IGHV3-41-201ENST00000613121 348 ntBASIC20.16■□□□□ 0.82
LCHNA4D1U4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.16■□□□□ 0.82
LCHNA4D1U4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCHNA4D1U4 AL162377.1-201ENST00000618844 1793 ntBASIC20.16■□□□□ 0.82
LCHNA4D1U4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 AF228730.7-201ENST00000641842 219 ntBASIC20.15■□□□□ 0.82
LCHNA4D1U4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LCHNA4D1U4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCHNA4D1U4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms