Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV5A0A0B4J249 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.65□□□□□ -0.07
TRAV5A0A0B4J249 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 AC092368.3-202ENST00000574180 1591 ntBASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 CDCA4P2-201ENST00000441182 718 ntBASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV5A0A0B4J249 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 AC091874.3-201ENST00000512672 1195 ntBASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 AC073592.3-201ENST00000625118 1834 ntBASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TRAV5A0A0B4J249 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms