Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 MIR548A3-201ENST00000385297 97 ntBASIC-0.52□□□□□ -2.49
ZNF560Q96MR9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.52□□□□□ -2.49
ZNF560Q96MR9 SNORD22.1-201ENST00000516331 125 ntBASIC-0.52□□□□□ -2.49
ZNF560Q96MR9 MIR4439-201ENST00000583746 80 ntBASIC-0.52□□□□□ -2.49
ZNF560Q96MR9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.52□□□□□ -2.49
ZNF560Q96MR9 RNU6-824P-201ENST00000363724 104 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 MIR204-201ENST00000385200 110 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 SNORA18.5-201ENST00000516616 101 ntBASIC-0.53□□□□□ -2.49
ZNF560Q96MR9 RNU6-382P-201ENST00000365181 106 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 MIR548U-201ENST00000390728 81 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 SNORD75.2-201ENST00000408784 58 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 RNU6-519P-201ENST00000410590 108 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 snoU13.17-201ENST00000458802 104 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 AC021146.9-201ENST00000512503 156 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 RNU6-904P-201ENST00000516206 101 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 RNU6-537P-201ENST00000517277 103 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 AC026421.1-201ENST00000519101 163 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 MIR3179-1-201ENST00000578940 84 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 MIR3179-2-201ENST00000579107 84 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 MIR3179-3-201ENST00000579566 84 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 MIR4493-201ENST00000584016 73 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 MIR6854-201ENST00000614935 69 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 MIR3179-4-201ENST00000617599 84 ntBASIC-0.54□□□□□ -2.5
ZNF560Q96MR9 RNU6-774P-201ENST00000363238 107 ntBASIC-0.55□□□□□ -2.5
ZNF560Q96MR9 RNU4-32P-201ENST00000363404 141 ntBASIC-0.55□□□□□ -2.5
ZNF560Q96MR9 SNORD114-4-201ENST00000363962 75 ntBASIC-0.55□□□□□ -2.5
ZNF560Q96MR9 MIR203A-201ENST00000384836 110 ntBASIC-0.55□□□□□ -2.5
ZNF560Q96MR9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.55□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 SNORD116-14-201ENST00000383894 92 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 SNORD116-17-201ENST00000383929 92 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 SNORD116-15-201ENST00000384445 92 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 RNU6-35P-201ENST00000384530 107 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 SNORD116-19-201ENST00000384729 92 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 MIR517B-201ENST00000385102 67 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 MIR548I1-201ENST00000408810 149 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 RNA5SP147-201ENST00000516493 109 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 MIR4464-201ENST00000580818 92 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 U6.95-201ENST00000636931 70 ntBASIC-0.56□□□□□ -2.5
ZNF560Q96MR9 MIR101-1-201ENST00000362265 75 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 SNORD58A-201ENST00000383875 65 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 RNU6-880P-201ENST00000384526 107 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 MIR590-201ENST00000385008 97 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 MIR518B-201ENST00000385127 83 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 AL078595.1-201ENST00000404458 226 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 AP000533.3-201ENST00000447704 118 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 RNU7-24P-201ENST00000458867 62 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 SNORD2-201ENST00000459163 69 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 RNU7-61P-201ENST00000515897 61 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 RNU6-62P-201ENST00000516526 102 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 RNU6-881P-201ENST00000516813 102 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 MIR3133-201ENST00000583157 78 ntBASIC-0.57□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 RNU4-36P-201ENST00000364294 144 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 SNORA33.1-201ENST00000364957 130 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 SNORD116-21-201ENST00000384507 92 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 SNORA19-201ENST00000384737 128 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 AC021146.6-201ENST00000514659 117 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 SCARNA23-201ENST00000516060 130 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 RNU6-109P-201ENST00000516364 107 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 RNU6-184P-201ENST00000516514 107 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 MIR4773-1-201ENST00000637203 78 ntBASIC-0.58□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 RNU6-887P-201ENST00000410660 100 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 AC022137.1-201ENST00000483735 151 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 RNU6-162P-201ENST00000516228 103 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 RNA5SP395-201ENST00000516567 118 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 RNU6-794P-201ENST00000517261 64 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.59□□□□□ -2.5
ZNF560Q96MR9 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 SNORD115-27-201ENST00000364430 82 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 RNU6-554P-201ENST00000410466 106 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 AL500527.2-201ENST00000454105 95 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 RNU7-153P-201ENST00000516455 62 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 MIR3657-201ENST00000584818 117 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 snoR1.1-201ENST00000628177 80 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 U6.96-201ENST00000636425 70 ntBASIC-0.6□□□□□ -2.51
ZNF560Q96MR9 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.61□□□□□ -2.51
ZNF560Q96MR9 RNU6-209P-201ENST00000384118 107 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms