Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 AC026333.2-201ENST00000542164 106 ntBASIC1.05□□□□□ -2.24
LCE4AQ5TA78 MIR6733-201ENST00000635723 61 ntBASIC1.05□□□□□ -2.24
LCE4AQ5TA78 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LCE4AQ5TA78 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LCE4AQ5TA78 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
LCE4AQ5TA78 Y_RNA.260-201ENST00000364628 101 ntBASIC1.04□□□□□ -2.24
LCE4AQ5TA78 RNA5SP224-201ENST00000365069 126 ntBASIC1.04□□□□□ -2.24
LCE4AQ5TA78 RNU6-851P-201ENST00000384565 107 ntBASIC1.04□□□□□ -2.24
LCE4AQ5TA78 RNA5SP24-201ENST00000516478 95 ntBASIC1.04□□□□□ -2.24
LCE4AQ5TA78 MIR3198-2-201ENST00000577868 80 ntBASIC1.04□□□□□ -2.24
LCE4AQ5TA78 MIR2682-201ENST00000580305 110 ntBASIC1.04□□□□□ -2.24
LCE4AQ5TA78 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.04□□□□□ -2.24
LCE4AQ5TA78 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.04□□□□□ -2.24
LCE4AQ5TA78 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LCE4AQ5TA78 MIR448-201ENST00000362131 111 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 MIR643-201ENST00000385267 97 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 MIR548Q-201ENST00000408404 100 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 RNA5SP492-201ENST00000411330 114 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.03□□□□□ -2.24
LCE4AQ5TA78 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 MIR4422-201ENST00000581938 83 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 RNU1-29P-201ENST00000606574 126 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 AC245884.12-201ENST00000615364 59 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 AC009487.2-201ENST00000420969 6821 ntBASIC1.03□□□□□ -2.24
LCE4AQ5TA78 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LCE4AQ5TA78 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
LCE4AQ5TA78 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.25
LCE4AQ5TA78 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
LCE4AQ5TA78 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
LCE4AQ5TA78 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
LCE4AQ5TA78 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.02□□□□□ -2.25
LCE4AQ5TA78 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
LCE4AQ5TA78 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
LCE4AQ5TA78 RNU6-1233P-201ENST00000362922 102 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 Y_RNA.335-201ENST00000365299 96 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 U8.9-201ENST00000365667 134 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.02□□□□□ -2.25
LCE4AQ5TA78 MIR196B-201ENST00000384852 84 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 RNU1-78P-201ENST00000391248 165 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 SNORD23.1-201ENST00000408212 104 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 CYP4A43P-201ENST00000568156 121 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 MIR5047-201ENST00000579212 100 ntBASIC1.02□□□□□ -2.25
LCE4AQ5TA78 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE4AQ5TA78 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LCE4AQ5TA78 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
LCE4AQ5TA78 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE4AQ5TA78 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE4AQ5TA78 SNORD15B-201ENST00000384714 146 ntBASIC1.01□□□□□ -2.25
LCE4AQ5TA78 AC006989.1-201ENST00000427212 131 ntBASIC1.01□□□□□ -2.25
LCE4AQ5TA78 AC079804.2-201ENST00000490376 200 ntBASIC1.01□□□□□ -2.25
LCE4AQ5TA78 AC008413.1-201ENST00000511864 177 ntBASIC1.01□□□□□ -2.25
LCE4AQ5TA78 RNA5SP458-201ENST00000516188 119 ntBASIC1.01□□□□□ -2.25
LCE4AQ5TA78 SNORD53-201ENST00000579969 78 ntBASIC1.01□□□□□ -2.25
LCE4AQ5TA78 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE4AQ5TA78 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 Y_RNA.226-201ENST00000364337 114 ntBASIC1□□□□□ -2.25
LCE4AQ5TA78 MIR106A-201ENST00000384870 81 ntBASIC1□□□□□ -2.25
LCE4AQ5TA78 MIR524-201ENST00000385242 87 ntBASIC1□□□□□ -2.25
LCE4AQ5TA78 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
LCE4AQ5TA78 AC087499.2-201ENST00000432861 149 ntBASIC1□□□□□ -2.25
LCE4AQ5TA78 AC002429.1-201ENST00000437672 148 ntBASIC1□□□□□ -2.25
LCE4AQ5TA78 AC079600.2-201ENST00000550076 130 ntBASIC1□□□□□ -2.25
LCE4AQ5TA78 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1□□□□□ -2.25
LCE4AQ5TA78 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
LCE4AQ5TA78 FTX-214ENST00000638437 12267 ntTSL 5 BASIC0.99□□□□□ -2.25
LCE4AQ5TA78 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC0.99□□□□□ -2.25
LCE4AQ5TA78 MIR22-201ENST00000362190 85 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 MIR379-201ENST00000362218 67 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC0.99□□□□□ -2.25
LCE4AQ5TA78 HLA-N-201ENST00000437516 135 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 SNORD109B-201ENST00000458961 67 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 SNORD109A-201ENST00000459128 67 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 AC008834.1-201ENST00000511612 175 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 RNU6-56P-201ENST00000516986 93 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 MIR4299-201ENST00000577899 72 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 AC010297.1-201ENST00000623948 149 ntBASIC0.99□□□□□ -2.25
LCE4AQ5TA78 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
LCE4AQ5TA78 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LCE4AQ5TA78 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
LCE4AQ5TA78 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LCE4AQ5TA78 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
LCE4AQ5TA78 MIR18A-201ENST00000362310 71 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 RNU6-859P-201ENST00000362728 107 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 RNA5SP42-201ENST00000364278 115 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 Y_RNA.320-201ENST00000365144 102 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 MIR9-1-201ENST00000385198 89 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 SNORD19-201ENST00000391191 68 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 MIR1287-201ENST00000408492 90 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 MIR4752-201ENST00000579672 72 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 uc_338.1-201ENST00000612113 180 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 AL391099.1-201ENST00000624635 187 ntBASIC0.98□□□□□ -2.25
LCE4AQ5TA78 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
LCE4AQ5TA78 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms