Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-772P-201ENST00000516042 105 ntBASIC-0.8□□□□□ -2.54
SCN1BQ07699 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.8□□□□□ -2.54
SCN1BQ07699 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.81□□□□□ -2.54
SCN1BQ07699 AC025521.1-201ENST00000621624 286 ntBASIC-0.81□□□□□ -2.54
SCN1BQ07699 AL035470.1-201ENST00000622571 220 ntBASIC-0.81□□□□□ -2.54
SCN1BQ07699 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.82□□□□□ -2.54
SCN1BQ07699 MIR9-2-201ENST00000384838 87 ntBASIC-0.82□□□□□ -2.54
SCN1BQ07699 SNORD57-201ENST00000448188 72 ntBASIC-0.82□□□□□ -2.54
SCN1BQ07699 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.82□□□□□ -2.54
SCN1BQ07699 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.82□□□□□ -2.54
SCN1BQ07699 RNU6-762P-201ENST00000517107 102 ntBASIC-0.82□□□□□ -2.54
SCN1BQ07699 MIR4694-201ENST00000578534 80 ntBASIC-0.82□□□□□ -2.54
SCN1BQ07699 SNORD114-14-201ENST00000362723 75 ntBASIC-0.83□□□□□ -2.54
SCN1BQ07699 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.83□□□□□ -2.54
SCN1BQ07699 RNU6-54P-201ENST00000365563 107 ntBASIC-0.83□□□□□ -2.54
SCN1BQ07699 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.83□□□□□ -2.54
SCN1BQ07699 SCARNA17-201ENST00000516183 144 ntBASIC-0.83□□□□□ -2.54
SCN1BQ07699 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.83□□□□□ -2.54
SCN1BQ07699 RNU6-75P-201ENST00000515944 104 ntBASIC-0.84□□□□□ -2.54
SCN1BQ07699 AL157777.2-201ENST00000258070 137 ntBASIC-0.85□□□□□ -2.55
SCN1BQ07699 RNU6-832P-201ENST00000363319 107 ntBASIC-0.85□□□□□ -2.55
SCN1BQ07699 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.85□□□□□ -2.55
SCN1BQ07699 SNORA40-201ENST00000388090 126 ntBASIC-0.85□□□□□ -2.55
SCN1BQ07699 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
SCN1BQ07699 RNU6-65P-201ENST00000516332 98 ntBASIC-0.85□□□□□ -2.55
SCN1BQ07699 RNU6-86P-201ENST00000606534 107 ntBASIC-0.85□□□□□ -2.55
SCN1BQ07699 MIR409-201ENST00000362237 79 ntBASIC-0.86□□□□□ -2.55
SCN1BQ07699 RNY1P7-201ENST00000384743 110 ntBASIC-0.86□□□□□ -2.55
SCN1BQ07699 SNORA49-201ENST00000386157 136 ntBASIC-0.86□□□□□ -2.55
SCN1BQ07699 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.86□□□□□ -2.55
SCN1BQ07699 AC093726.3-201ENST00000637588 150 ntBASIC-0.86□□□□□ -2.55
SCN1BQ07699 SNORD115-25-201ENST00000362619 82 ntBASIC-0.87□□□□□ -2.55
SCN1BQ07699 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.87□□□□□ -2.55
SCN1BQ07699 RNU6-900P-201ENST00000384498 102 ntBASIC-0.87□□□□□ -2.55
SCN1BQ07699 RNU6-901P-201ENST00000384593 106 ntBASIC-0.87□□□□□ -2.55
SCN1BQ07699 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
SCN1BQ07699 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 RNY3P2-201ENST00000362918 102 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 SNORA3B-201ENST00000391305 131 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 RNA5SP266-201ENST00000410273 108 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 RNU7-200P-201ENST00000516105 62 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 MIR4679-2-201ENST00000578358 77 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 MIR4536-1-201ENST00000583537 88 ntBASIC-0.88□□□□□ -2.55
SCN1BQ07699 RNU7-107P-201ENST00000459121 61 ntBASIC-0.89□□□□□ -2.55
SCN1BQ07699 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.89□□□□□ -2.55
SCN1BQ07699 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.89□□□□□ -2.55
SCN1BQ07699 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 SNORD50.2-201ENST00000365465 70 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 MIR582-201ENST00000365731 98 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 SNORD56B-201ENST00000384713 71 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 U3.27-201ENST00000391237 200 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 RNU6-257P-201ENST00000410238 98 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 FGF7P7-201ENST00000514120 227 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 AC068339.1-201ENST00000526965 141 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 AL513043.2-201ENST00000573941 143 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 AC145423.2-201ENST00000610631 239 ntBASIC-0.9□□□□□ -2.55
SCN1BQ07699 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.91□□□□□ -2.56
SCN1BQ07699 SNORD114-4-201ENST00000363962 75 ntBASIC-0.92□□□□□ -2.56
SCN1BQ07699 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.92□□□□□ -2.56
SCN1BQ07699 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.92□□□□□ -2.56
SCN1BQ07699 snoU13.13-201ENST00000458842 104 ntBASIC-0.92□□□□□ -2.56
SCN1BQ07699 SNORD2-201ENST00000459163 69 ntBASIC-0.92□□□□□ -2.56
SCN1BQ07699 RNA5SP169-201ENST00000517268 117 ntBASIC-0.92□□□□□ -2.56
SCN1BQ07699 MIR4324-201ENST00000584846 72 ntBASIC-0.92□□□□□ -2.56
SCN1BQ07699 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.93□□□□□ -2.56
SCN1BQ07699 MIR587-201ENST00000384845 96 ntBASIC-0.93□□□□□ -2.56
SCN1BQ07699 MIR548E-201ENST00000408287 88 ntBASIC-0.93□□□□□ -2.56
SCN1BQ07699 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.93□□□□□ -2.56
SCN1BQ07699 RNU7-85P-201ENST00000458851 63 ntBASIC-0.93□□□□□ -2.56
SCN1BQ07699 RNU6-719P-201ENST00000516671 104 ntBASIC-0.93□□□□□ -2.56
SCN1BQ07699 MIR3613-201ENST00000579844 87 ntBASIC-0.93□□□□□ -2.56
SCN1BQ07699 RNU4-32P-201ENST00000363404 141 ntBASIC-0.94□□□□□ -2.56
SCN1BQ07699 SNORD45B-201ENST00000364617 72 ntBASIC-0.94□□□□□ -2.56
SCN1BQ07699 AC097510.1-201ENST00000510945 133 ntBASIC-0.94□□□□□ -2.56
SCN1BQ07699 MIR6738-201ENST00000619620 64 ntBASIC-0.94□□□□□ -2.56
SCN1BQ07699 RNU6-971P-201ENST00000516920 106 ntBASIC-0.95□□□□□ -2.56
SCN1BQ07699 SNORA40.17-201ENST00000517256 115 ntBASIC-0.95□□□□□ -2.56
SCN1BQ07699 MIR4439-201ENST00000583746 80 ntBASIC-0.95□□□□□ -2.56
SCN1BQ07699 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.96□□□□□ -2.56
SCN1BQ07699 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.96□□□□□ -2.56
SCN1BQ07699 SNORD42B-201ENST00000458893 67 ntBASIC-0.96□□□□□ -2.56
SCN1BQ07699 RNU7-55P-201ENST00000459426 62 ntBASIC-0.96□□□□□ -2.56
SCN1BQ07699 RNU6-346P-201ENST00000516288 111 ntBASIC-0.96□□□□□ -2.56
SCN1BQ07699 AC090425.1-201ENST00000610007 140 ntBASIC-0.96□□□□□ -2.56
SCN1BQ07699 RNU6-10P-201ENST00000384036 107 ntBASIC-0.97□□□□□ -2.56
SCN1BQ07699 MIR204-201ENST00000385200 110 ntBASIC-0.97□□□□□ -2.56
SCN1BQ07699 snosnR66.1-201ENST00000391095 99 ntBASIC-0.97□□□□□ -2.56
SCN1BQ07699 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.97□□□□□ -2.56
SCN1BQ07699 SNORD33.1-201ENST00000516213 88 ntBASIC-0.97□□□□□ -2.56
SCN1BQ07699 MIR5009-201ENST00000578736 100 ntBASIC-0.97□□□□□ -2.56
SCN1BQ07699 MIR3914-2-201ENST00000637339 95 ntBASIC-0.97□□□□□ -2.56
SCN1BQ07699 RNU6-132P-201ENST00000383863 107 ntBASIC-0.98□□□□□ -2.57
SCN1BQ07699 MIR548A1-201ENST00000385041 97 ntBASIC-0.98□□□□□ -2.57
SCN1BQ07699 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.98□□□□□ -2.57
SCN1BQ07699 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms