Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 MIR6888-201ENST00000621977 67 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 RNA5SP26-201ENST00000362406 119 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 RNU6-623P-201ENST00000363143 105 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 RNU6-164P-201ENST00000364604 103 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 RNU6-690P-201ENST00000365242 106 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 MIR34C-201ENST00000384831 77 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 SNORD63.1-201ENST00000516178 80 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.78□□□□□ -2.69
TREM1Q9NP99 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.78□□□□□ -2.69
TREM1Q9NP99 RNY4P27-201ENST00000363341 96 ntBASIC-1.79□□□□□ -2.7
TREM1Q9NP99 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.79□□□□□ -2.7
TREM1Q9NP99 SNORD114-3-201ENST00000364969 75 ntBASIC-1.79□□□□□ -2.7
TREM1Q9NP99 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.79□□□□□ -2.7
TREM1Q9NP99 SNORD77B-201ENST00000391112 67 ntBASIC-1.79□□□□□ -2.7
TREM1Q9NP99 MIR4308-201ENST00000580634 81 ntBASIC-1.79□□□□□ -2.7
TREM1Q9NP99 MIR4696-201ENST00000581431 70 ntBASIC-1.79□□□□□ -2.7
TREM1Q9NP99 RNU6-228P-201ENST00000362700 106 ntBASIC-1.8□□□□□ -2.7
TREM1Q9NP99 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.8□□□□□ -2.7
TREM1Q9NP99 SNORD101-201ENST00000384027 73 ntBASIC-1.8□□□□□ -2.7
TREM1Q9NP99 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.8□□□□□ -2.7
TREM1Q9NP99 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.81□□□□□ -2.7
TREM1Q9NP99 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.81□□□□□ -2.7
TREM1Q9NP99 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.81□□□□□ -2.7
TREM1Q9NP99 SNORA63.6-201ENST00000364921 119 ntBASIC-1.81□□□□□ -2.7
TREM1Q9NP99 RNU6-381P-201ENST00000391259 108 ntBASIC-1.81□□□□□ -2.7
TREM1Q9NP99 RNU6-664P-201ENST00000362381 107 ntBASIC-1.82□□□□□ -2.7
TREM1Q9NP99 RNU6-616P-201ENST00000384353 107 ntBASIC-1.82□□□□□ -2.7
TREM1Q9NP99 RNU6-880P-201ENST00000384526 107 ntBASIC-1.82□□□□□ -2.7
TREM1Q9NP99 RNU6-121P-201ENST00000410525 99 ntBASIC-1.82□□□□□ -2.7
TREM1Q9NP99 RNU6-277P-201ENST00000516272 106 ntBASIC-1.82□□□□□ -2.7
TREM1Q9NP99 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.82□□□□□ -2.7
TREM1Q9NP99 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.82□□□□□ -2.7
TREM1Q9NP99 RNU6-103P-201ENST00000363686 107 ntBASIC-1.83□□□□□ -2.7
TREM1Q9NP99 RNU6-647P-201ENST00000364243 107 ntBASIC-1.83□□□□□ -2.7
TREM1Q9NP99 SNORD115-27-201ENST00000364430 82 ntBASIC-1.83□□□□□ -2.7
TREM1Q9NP99 MIR487B-201ENST00000385021 84 ntBASIC-1.83□□□□□ -2.7
TREM1Q9NP99 AC108019.1-201ENST00000512540 175 ntBASIC-1.83□□□□□ -2.7
TREM1Q9NP99 AC090617.8-201ENST00000623339 167 ntBASIC-1.83□□□□□ -2.7
TREM1Q9NP99 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.84□□□□□ -2.7
TREM1Q9NP99 MT-TL1-201ENST00000386347 75 ntBASIC-1.84□□□□□ -2.7
TREM1Q9NP99 SNORA26.4-201ENST00000391188 123 ntBASIC-1.84□□□□□ -2.7
TREM1Q9NP99 RNU6-935P-201ENST00000410371 100 ntBASIC-1.84□□□□□ -2.7
TREM1Q9NP99 AC138393.2-201ENST00000414742 246 ntBASIC-1.84□□□□□ -2.7
TREM1Q9NP99 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.84□□□□□ -2.7
TREM1Q9NP99 AP002392.1-201ENST00000537692 208 ntBASIC-1.84□□□□□ -2.7
TREM1Q9NP99 AC073869.6-201ENST00000640656 341 ntBASIC-1.84□□□□□ -2.7
TREM1Q9NP99 RNU6-235P-201ENST00000362644 107 ntBASIC-1.85□□□□□ -2.71
TREM1Q9NP99 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.85□□□□□ -2.71
TREM1Q9NP99 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.85□□□□□ -2.71
TREM1Q9NP99 MIR451A-201ENST00000385059 72 ntBASIC-1.85□□□□□ -2.71
TREM1Q9NP99 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.85□□□□□ -2.71
TREM1Q9NP99 SNORD115-19-201ENST00000363098 82 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 SNORD115-18-201ENST00000363293 82 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 SNORD115-33-201ENST00000363723 82 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 SNORD115-17-201ENST00000364612 82 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 RNU6-876P-201ENST00000391295 104 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 AL121914.1-201ENST00000450188 156 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 SNORD2.1-201ENST00000458762 69 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 RNU7-123P-201ENST00000515911 60 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 MIR664B-201ENST00000626756 61 ntBASIC-1.86□□□□□ -2.71
TREM1Q9NP99 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.87□□□□□ -2.71
TREM1Q9NP99 AL078595.1-201ENST00000404458 226 ntBASIC-1.87□□□□□ -2.71
TREM1Q9NP99 RNA5SP236-201ENST00000516169 116 ntBASIC-1.87□□□□□ -2.71
TREM1Q9NP99 SNORA40.15-201ENST00000516884 107 ntBASIC-1.87□□□□□ -2.71
TREM1Q9NP99 MIR1302-1-201ENST00000637932 143 ntBASIC-1.87□□□□□ -2.71
TREM1Q9NP99 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 RNY1P11-201ENST00000363759 113 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 RNU6-312P-201ENST00000364629 107 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 MIR1252-201ENST00000408861 65 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 FGF7P6-202ENST00000451282 293 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 RNU7-164P-201ENST00000459221 62 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 MIR4756-201ENST00000577874 78 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 AC021443.1-201ENST00000604478 211 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 U6.96-201ENST00000636425 70 ntBASIC-1.88□□□□□ -2.71
TREM1Q9NP99 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.89□□□□□ -2.71
TREM1Q9NP99 SNORD115-22-201ENST00000364456 82 ntBASIC-1.89□□□□□ -2.71
TREM1Q9NP99 RNU4-17P-201ENST00000365598 141 ntBASIC-1.89□□□□□ -2.71
TREM1Q9NP99 MIR548H3-201ENST00000408771 118 ntBASIC-1.89□□□□□ -2.71
TREM1Q9NP99 SNORD75.2-201ENST00000408784 58 ntBASIC-1.89□□□□□ -2.71
TREM1Q9NP99 RNU6-240P-201ENST00000516098 97 ntBASIC-1.89□□□□□ -2.71
TREM1Q9NP99 AC138907.4-201ENST00000570107 226 ntBASIC-1.89□□□□□ -2.71
TREM1Q9NP99 RNU6-990P-201ENST00000364385 104 ntBASIC-1.9□□□□□ -2.71
TREM1Q9NP99 Z83846.1-201ENST00000446798 265 ntBASIC-1.9□□□□□ -2.71
TREM1Q9NP99 SNORD19B-201ENST00000459623 84 ntBASIC-1.9□□□□□ -2.71
TREM1Q9NP99 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.9□□□□□ -2.71
TREM1Q9NP99 AC108081.1-201ENST00000604358 221 ntBASIC-1.9□□□□□ -2.71
TREM1Q9NP99 RNU6-924P-201ENST00000362926 108 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms