Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 Y_RNA.325-201ENST00000365171 122 ntBASIC3.32□□□□□ -1.88
PPP4R3CPQ6ZMV5 SNORD116.2-201ENST00000391251 93 ntBASIC3.32□□□□□ -1.88
PPP4R3CPQ6ZMV5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.32□□□□□ -1.88
PPP4R3CPQ6ZMV5 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
PPP4R3CPQ6ZMV5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PPP4R3CPQ6ZMV5 SNORA63.6-201ENST00000364921 119 ntBASIC3.31□□□□□ -1.88
PPP4R3CPQ6ZMV5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
PPP4R3CPQ6ZMV5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
PPP4R3CPQ6ZMV5 SNORA25.8-201ENST00000364831 128 ntBASIC3.3□□□□□ -1.88
PPP4R3CPQ6ZMV5 RNU1-78P-201ENST00000391248 165 ntBASIC3.3□□□□□ -1.88
PPP4R3CPQ6ZMV5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PPP4R3CPQ6ZMV5 AC062016.1-201ENST00000355719 319 ntBASIC3.29□□□□□ -1.88
PPP4R3CPQ6ZMV5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PPP4R3CPQ6ZMV5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC3.28□□□□□ -1.88
PPP4R3CPQ6ZMV5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC3.28□□□□□ -1.88
PPP4R3CPQ6ZMV5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC3.28□□□□□ -1.88
PPP4R3CPQ6ZMV5 AC107016.2-201ENST00000547968 190 ntBASIC3.28□□□□□ -1.88
PPP4R3CPQ6ZMV5 MIR3198-2-201ENST00000577868 80 ntBASIC3.28□□□□□ -1.88
PPP4R3CPQ6ZMV5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNU6-716P-201ENST00000365621 103 ntBASIC3.27□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNU6-269P-201ENST00000391077 97 ntBASIC3.27□□□□□ -1.89
PPP4R3CPQ6ZMV5 MIR4781-201ENST00000585250 76 ntBASIC3.27□□□□□ -1.89
PPP4R3CPQ6ZMV5 MIR517C-201ENST00000385103 95 ntBASIC3.26□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNA5SP356-201ENST00000515972 94 ntBASIC3.26□□□□□ -1.89
PPP4R3CPQ6ZMV5 SCARNA17.3-201ENST00000516381 125 ntBASIC3.26□□□□□ -1.89
PPP4R3CPQ6ZMV5 AC015712.3-201ENST00000559380 164 ntBASIC3.26□□□□□ -1.89
PPP4R3CPQ6ZMV5 MIR4422-201ENST00000581938 83 ntBASIC3.26□□□□□ -1.89
PPP4R3CPQ6ZMV5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PPP4R3CPQ6ZMV5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 AC093010.3-201ENST00000570269 15214 ntBASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 SNORA9.1-201ENST00000362412 131 ntBASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 SNORA9.2-201ENST00000365361 133 ntBASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNU6-851P-201ENST00000384565 107 ntBASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNA5SP47-201ENST00000517230 109 ntBASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 MIR548X-201ENST00000580069 75 ntBASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 MIR7110-201ENST00000612638 86 ntBASIC3.25□□□□□ -1.89
PPP4R3CPQ6ZMV5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.24□□□□□ -1.89
PPP4R3CPQ6ZMV5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.24□□□□□ -1.89
PPP4R3CPQ6ZMV5 MIR548F3-201ENST00000408509 87 ntBASIC3.24□□□□□ -1.89
PPP4R3CPQ6ZMV5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PPP4R3CPQ6ZMV5 SNORA80A-201ENST00000363922 136 ntBASIC3.23□□□□□ -1.89
PPP4R3CPQ6ZMV5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.23□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNA5SP484-201ENST00000458857 111 ntBASIC3.23□□□□□ -1.89
PPP4R3CPQ6ZMV5 AL033523.1-201ENST00000605153 153 ntBASIC3.23□□□□□ -1.89
PPP4R3CPQ6ZMV5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PPP4R3CPQ6ZMV5 SNORD18A-201ENST00000363753 72 ntBASIC3.22□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNU1-40P-201ENST00000516816 164 ntBASIC3.22□□□□□ -1.89
PPP4R3CPQ6ZMV5 RNU1-97P-201ENST00000516872 164 ntBASIC3.22□□□□□ -1.89
PPP4R3CPQ6ZMV5 SNORA40.16-201ENST00000517238 121 ntBASIC3.22□□□□□ -1.89
PPP4R3CPQ6ZMV5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 Y_RNA.407-201ENST00000383986 113 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 SNORD116-16-201ENST00000384533 92 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 MIR17-201ENST00000385012 84 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 COTL1P1-201ENST00000422309 375 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 AC079804.2-201ENST00000490376 200 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 AC006386.2-201ENST00000624491 75 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 AC012005.1-201ENST00000624575 75 ntBASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PPP4R3CPQ6ZMV5 AL021921.1-201ENST00000442774 93 ntBASIC3.2□□□□□ -1.9
PPP4R3CPQ6ZMV5 SNORA70.22-201ENST00000517160 124 ntBASIC3.2□□□□□ -1.9
PPP4R3CPQ6ZMV5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PPP4R3CPQ6ZMV5 Y_RNA.74-201ENST00000362911 99 ntBASIC3.19□□□□□ -1.9
PPP4R3CPQ6ZMV5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PPP4R3CPQ6ZMV5 SNORA11.2-201ENST00000408318 127 ntBASIC3.19□□□□□ -1.9
PPP4R3CPQ6ZMV5 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
PPP4R3CPQ6ZMV5 RNU6-548P-201ENST00000517083 115 ntBASIC3.19□□□□□ -1.9
PPP4R3CPQ6ZMV5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PPP4R3CPQ6ZMV5 MIR512-1-201ENST00000384913 84 ntBASIC3.18□□□□□ -1.9
PPP4R3CPQ6ZMV5 MIR652-201ENST00000385278 98 ntBASIC3.18□□□□□ -1.9
PPP4R3CPQ6ZMV5 SNORD12-201ENST00000391002 90 ntBASIC3.18□□□□□ -1.9
PPP4R3CPQ6ZMV5 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
PPP4R3CPQ6ZMV5 CYP3A54P-201ENST00000566950 75 ntBASIC3.18□□□□□ -1.9
PPP4R3CPQ6ZMV5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PPP4R3CPQ6ZMV5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PPP4R3CPQ6ZMV5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PPP4R3CPQ6ZMV5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PPP4R3CPQ6ZMV5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PPP4R3CPQ6ZMV5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC3.16□□□□□ -1.9
PPP4R3CPQ6ZMV5 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
PPP4R3CPQ6ZMV5 RNA5SP393-201ENST00000363423 117 ntBASIC3.15□□□□□ -1.91
PPP4R3CPQ6ZMV5 RNU6-1246P-201ENST00000391064 107 ntBASIC3.15□□□□□ -1.91
PPP4R3CPQ6ZMV5 MIR4513-201ENST00000581077 86 ntBASIC3.15□□□□□ -1.91
PPP4R3CPQ6ZMV5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PPP4R3CPQ6ZMV5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
PPP4R3CPQ6ZMV5 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
PPP4R3CPQ6ZMV5 U6.96-201ENST00000636425 70 ntBASIC3.14□□□□□ -1.91
PPP4R3CPQ6ZMV5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PPP4R3CPQ6ZMV5 SCARNA16.5-201ENST00000517114 183 ntBASIC3.13□□□□□ -1.91
PPP4R3CPQ6ZMV5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.13□□□□□ -1.91
PPP4R3CPQ6ZMV5 MIR26A1-201ENST00000362205 77 ntBASIC3.12□□□□□ -1.91
PPP4R3CPQ6ZMV5 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PPP4R3CPQ6ZMV5 SNORD88.1-201ENST00000408684 91 ntBASIC3.12□□□□□ -1.91
PPP4R3CPQ6ZMV5 RNU1-92P-201ENST00000517017 135 ntBASIC3.12□□□□□ -1.91
PPP4R3CPQ6ZMV5 MIR6852-201ENST00000621699 66 ntBASIC3.12□□□□□ -1.91
PPP4R3CPQ6ZMV5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
PPP4R3CPQ6ZMV5 Y_RNA.500-201ENST00000384466 111 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms