Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPM3O75607 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPM3O75607 SNORA7.1-201ENST00000363750 139 ntBASIC3.27□□□□□ -1.89
NPM3O75607 RNU6-301P-201ENST00000384277 107 ntBASIC3.27□□□□□ -1.89
NPM3O75607 MIR17-201ENST00000385012 84 ntBASIC3.27□□□□□ -1.89
NPM3O75607 RNU6-910P-201ENST00000390844 107 ntBASIC3.27□□□□□ -1.89
NPM3O75607 MIR1827-201ENST00000408549 66 ntBASIC3.27□□□□□ -1.89
NPM3O75607 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NPM3O75607 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPM3O75607 RNA5SP393-201ENST00000363423 117 ntBASIC3.26□□□□□ -1.89
NPM3O75607 AC108210.2-201ENST00000503681 201 ntBASIC3.26□□□□□ -1.89
NPM3O75607 MIR3605-201ENST00000583214 100 ntBASIC3.26□□□□□ -1.89
NPM3O75607 RMST_2.1-201ENST00000617263 136 ntBASIC3.26□□□□□ -1.89
NPM3O75607 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NPM3O75607 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.26□□□□□ -1.89
NPM3O75607 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPM3O75607 AC021146.9-201ENST00000512503 156 ntBASIC3.25□□□□□ -1.89
NPM3O75607 RNA5SP282-201ENST00000516355 108 ntBASIC3.25□□□□□ -1.89
NPM3O75607 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.24□□□□□ -1.89
NPM3O75607 SNORA15B-2-201ENST00000384058 135 ntBASIC3.24□□□□□ -1.89
NPM3O75607 SNORA15B-1-201ENST00000384334 135 ntBASIC3.24□□□□□ -1.89
NPM3O75607 MIR221-201ENST00000385135 110 ntBASIC3.24□□□□□ -1.89
NPM3O75607 RNU1-78P-201ENST00000391248 165 ntBASIC3.24□□□□□ -1.89
NPM3O75607 RNU7-119P-201ENST00000459279 63 ntBASIC3.24□□□□□ -1.89
NPM3O75607 SNORD79.1-201ENST00000516069 84 ntBASIC3.24□□□□□ -1.89
NPM3O75607 MIR4422-201ENST00000581938 83 ntBASIC3.24□□□□□ -1.89
NPM3O75607 AC244669.1-204ENST00000621564 178 ntBASIC3.24□□□□□ -1.89
NPM3O75607 MIR196B-201ENST00000384852 84 ntBASIC3.23□□□□□ -1.89
NPM3O75607 MIR4446-201ENST00000578505 67 ntBASIC3.23□□□□□ -1.89
NPM3O75607 MIR3945-201ENST00000581853 98 ntBASIC3.23□□□□□ -1.89
NPM3O75607 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.23□□□□□ -1.89
NPM3O75607 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
NPM3O75607 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
NPM3O75607 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPM3O75607 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
NPM3O75607 RNA5SP68-201ENST00000363885 119 ntBASIC3.22□□□□□ -1.89
NPM3O75607 SNORD28-201ENST00000384706 75 ntBASIC3.22□□□□□ -1.89
NPM3O75607 MIR644A-201ENST00000385262 94 ntBASIC3.22□□□□□ -1.89
NPM3O75607 RPS29P6-201ENST00000438196 145 ntBASIC3.22□□□□□ -1.89
NPM3O75607 AC002350.1-201ENST00000490759 375 ntBASIC3.22□□□□□ -1.89
NPM3O75607 RNU7-174P-201ENST00000516248 59 ntBASIC3.22□□□□□ -1.89
NPM3O75607 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPM3O75607 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NPM3O75607 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPM3O75607 RNU1-141P-201ENST00000364623 158 ntBASIC3.21□□□□□ -1.9
NPM3O75607 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NPM3O75607 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
NPM3O75607 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
NPM3O75607 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPM3O75607 MIR6817-201ENST00000615588 66 ntBASIC3.2□□□□□ -1.9
NPM3O75607 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPM3O75607 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.2□□□□□ -1.9
NPM3O75607 RNU6-753P-201ENST00000363926 107 ntBASIC3.19□□□□□ -1.9
NPM3O75607 RNA5SP233-201ENST00000459153 113 ntBASIC3.19□□□□□ -1.9
NPM3O75607 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPM3O75607 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NPM3O75607 U2.7-201ENST00000619197 100 ntBASIC3.18□□□□□ -1.9
NPM3O75607 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
NPM3O75607 snoU13.13-201ENST00000458842 104 ntBASIC3.16□□□□□ -1.9
NPM3O75607 RNA5SP402-201ENST00000517148 110 ntBASIC3.16□□□□□ -1.9
NPM3O75607 MIR548AD-201ENST00000584780 82 ntBASIC3.16□□□□□ -1.9
NPM3O75607 FO624990.1-201ENST00000636373 85 ntBASIC3.16□□□□□ -1.9
NPM3O75607 MIR887-201ENST00000401258 79 ntBASIC3.15□□□□□ -1.91
NPM3O75607 RNU6ATAC8P-201ENST00000408460 126 ntBASIC3.15□□□□□ -1.91
NPM3O75607 RNA5SP148-201ENST00000516527 94 ntBASIC3.15□□□□□ -1.91
NPM3O75607 MIR4781-201ENST00000585250 76 ntBASIC3.15□□□□□ -1.91
NPM3O75607 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPM3O75607 MIR4435-1-201ENST00000582552 80 ntBASIC3.14□□□□□ -1.91
NPM3O75607 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.14□□□□□ -1.91
NPM3O75607 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC3.14□□□□□ -1.91
NPM3O75607 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC3.14□□□□□ -1.91
NPM3O75607 RNU6-726P-201ENST00000364680 107 ntBASIC3.13□□□□□ -1.91
NPM3O75607 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.13□□□□□ -1.91
NPM3O75607 RNU5B-6P-201ENST00000516765 68 ntBASIC3.13□□□□□ -1.91
NPM3O75607 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC3.13□□□□□ -1.91
NPM3O75607 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC3.13□□□□□ -1.91
NPM3O75607 U4.4-201ENST00000620626 117 ntBASIC3.13□□□□□ -1.91
NPM3O75607 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPM3O75607 SNORA8.2-201ENST00000384372 139 ntBASIC3.12□□□□□ -1.91
NPM3O75607 MIR758-201ENST00000390227 88 ntBASIC3.12□□□□□ -1.91
NPM3O75607 SNORD12-201ENST00000391002 90 ntBASIC3.12□□□□□ -1.91
NPM3O75607 SNORA70.22-201ENST00000517160 124 ntBASIC3.12□□□□□ -1.91
NPM3O75607 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPM3O75607 MIR27B-201ENST00000385129 97 ntBASIC3.11□□□□□ -1.91
NPM3O75607 RNU6ATAC29P-201ENST00000408088 125 ntBASIC3.11□□□□□ -1.91
NPM3O75607 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC3.11□□□□□ -1.91
NPM3O75607 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
NPM3O75607 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
NPM3O75607 AC008834.1-201ENST00000511612 175 ntBASIC3.1□□□□□ -1.91
NPM3O75607 RNU1-40P-201ENST00000516816 164 ntBASIC3.1□□□□□ -1.91
NPM3O75607 RNU1-97P-201ENST00000516872 164 ntBASIC3.1□□□□□ -1.91
NPM3O75607 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.1□□□□□ -1.91
NPM3O75607 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPM3O75607 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NPM3O75607 Y_RNA.125-201ENST00000363371 111 ntBASIC3.09□□□□□ -1.91
NPM3O75607 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.91
NPM3O75607 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
NPM3O75607 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.92
NPM3O75607 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPM3O75607 HMGN2P19-201ENST00000425149 265 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms