Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SNORD114-4-201ENST00000363962 75 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 RNU6-54P-201ENST00000365563 107 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 MIR487B-201ENST00000385021 84 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 MIRLET7B-201ENST00000385140 83 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 RNU7-164P-201ENST00000459221 62 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.39□□□□□ -2.63
SGCEO43556 AC021443.1-201ENST00000604478 211 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 AL132765.2-201ENST00000610812 351 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.39□□□□□ -2.63
SGCEO43556 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.39□□□□□ -2.63
SGCEO43556 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 RNU6-957P-201ENST00000363652 99 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 RNU6-823P-201ENST00000391042 103 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 RNU6-101P-201ENST00000410323 104 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 SNORD2.1-201ENST00000458762 69 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 RNU6-240P-201ENST00000516098 97 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 RNU6-762P-201ENST00000517107 102 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 AC138907.4-201ENST00000570107 226 ntBASIC-1.4□□□□□ -2.63
SGCEO43556 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 RNU6-235P-201ENST00000362644 107 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 RNU6-228P-201ENST00000362700 106 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 SNORD101-201ENST00000384027 73 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 MIR124-2-201ENST00000385081 109 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 RNU6-337P-201ENST00000391243 106 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 MIR4696-201ENST00000581431 70 ntBASIC-1.41□□□□□ -2.64
SGCEO43556 RNU6-704P-201ENST00000364162 103 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 RNA5SP331-201ENST00000364986 107 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 RNU4-17P-201ENST00000365598 141 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 RNU6-576P-201ENST00000390854 102 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 MIR548H1-201ENST00000408610 102 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 RNY3P15-201ENST00000516297 97 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.42□□□□□ -2.64
SGCEO43556 RNU6-664P-201ENST00000362381 107 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 RNU6-746P-201ENST00000384112 109 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 SNORD38.2-201ENST00000384470 69 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 MIR29B1-201ENST00000385015 81 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 AL365265.1-201ENST00000621045 234 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 AC090971.5-201ENST00000621102 293 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.43□□□□□ -2.64
SGCEO43556 MIR335-201ENST00000362173 94 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 SNORA62.4-201ENST00000365504 151 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 RNU6-935P-201ENST00000410371 100 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 SNORD42B-201ENST00000458893 67 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 MIR4744-201ENST00000581563 82 ntBASIC-1.44□□□□□ -2.64
SGCEO43556 RNY4P6-201ENST00000363667 96 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 RNY1P11-201ENST00000363759 113 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 RNU6-450P-201ENST00000364654 107 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 RNU6-466P-201ENST00000391224 103 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 AC113618.1-201ENST00000416747 285 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 ELOCP20-201ENST00000422460 345 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 RNU6-732P-201ENST00000516033 103 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 AL353803.5-201ENST00000599815 141 ntBASIC-1.45□□□□□ -2.64
SGCEO43556 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.46□□□□□ -2.64
SGCEO43556 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.46□□□□□ -2.64
SGCEO43556 AC022028.1-201ENST00000412054 408 ntBASIC-1.46□□□□□ -2.64
SGCEO43556 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.46□□□□□ -2.64
SGCEO43556 FGF7P4-201ENST00000509595 295 ntBASIC-1.46□□□□□ -2.64
SGCEO43556 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.46□□□□□ -2.64
SGCEO43556 RNA5SP26-201ENST00000362406 119 ntBASIC-1.47□□□□□ -2.64
SGCEO43556 RNY4P27-201ENST00000363341 96 ntBASIC-1.47□□□□□ -2.64
SGCEO43556 SNORD114-3-201ENST00000364969 75 ntBASIC-1.47□□□□□ -2.64
SGCEO43556 RNU6-651P-201ENST00000411040 105 ntBASIC-1.47□□□□□ -2.64
SGCEO43556 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.48□□□□□ -2.65
SGCEO43556 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.48□□□□□ -2.65
SGCEO43556 SNORA63.6-201ENST00000364921 119 ntBASIC-1.48□□□□□ -2.65
SGCEO43556 RNU6-880P-201ENST00000384526 107 ntBASIC-1.48□□□□□ -2.65
SGCEO43556 U3.27-201ENST00000391237 200 ntBASIC-1.48□□□□□ -2.65
SGCEO43556 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms