Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 Y_RNA.443-201ENST00000384135 111 ntBASIC2.21□□□□□ -2.06
USB1Q9BQ65 U3.27-201ENST00000391237 200 ntBASIC2.21□□□□□ -2.06
USB1Q9BQ65 AL359511.1-201ENST00000402970 211 ntBASIC2.21□□□□□ -2.06
USB1Q9BQ65 RNU6-287P-201ENST00000516230 98 ntBASIC2.21□□□□□ -2.06
USB1Q9BQ65 RNU7-40P-201ENST00000516397 64 ntBASIC2.21□□□□□ -2.06
USB1Q9BQ65 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.21□□□□□ -2.06
USB1Q9BQ65 AC106800.4-201ENST00000614905 153 ntBASIC2.21□□□□□ -2.06
USB1Q9BQ65 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
USB1Q9BQ65 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USB1Q9BQ65 MIR938-201ENST00000401216 83 ntBASIC2.2□□□□□ -2.06
USB1Q9BQ65 AC244505.6-201ENST00000452829 130 ntBASIC2.2□□□□□ -2.06
USB1Q9BQ65 RNU6-274P-201ENST00000459566 107 ntBASIC2.2□□□□□ -2.06
USB1Q9BQ65 RNU1-41P-201ENST00000516161 162 ntBASIC2.2□□□□□ -2.06
USB1Q9BQ65 RNU1-48P-201ENST00000516400 162 ntBASIC2.2□□□□□ -2.06
USB1Q9BQ65 AC023827.1-201ENST00000569247 97 ntBASIC2.2□□□□□ -2.06
USB1Q9BQ65 AC027335.2-201ENST00000624030 375 ntBASIC2.2□□□□□ -2.06
USB1Q9BQ65 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.2□□□□□ -2.06
USB1Q9BQ65 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USB1Q9BQ65 MIR9-2-201ENST00000384838 87 ntBASIC2.19□□□□□ -2.06
USB1Q9BQ65 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
USB1Q9BQ65 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USB1Q9BQ65 RNU6-1216P-201ENST00000362590 107 ntBASIC2.18□□□□□ -2.06
USB1Q9BQ65 SNORD115-44-201ENST00000365391 82 ntBASIC2.18□□□□□ -2.06
USB1Q9BQ65 RNU6-604P-201ENST00000390917 100 ntBASIC2.18□□□□□ -2.06
USB1Q9BQ65 RNU7-102P-201ENST00000458948 62 ntBASIC2.18□□□□□ -2.06
USB1Q9BQ65 SNORA31.2-201ENST00000516019 134 ntBASIC2.18□□□□□ -2.06
USB1Q9BQ65 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.18□□□□□ -2.06
USB1Q9BQ65 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USB1Q9BQ65 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USB1Q9BQ65 SNORD113.1-201ENST00000363280 73 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 SNORD114-30-201ENST00000364448 72 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 RNU6-382P-201ENST00000365181 106 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 RNA5SP320-201ENST00000516263 124 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 RNU6-752P-201ENST00000516376 102 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 RN7SKP88-201ENST00000516847 250 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 7SK.8-201ENST00000612110 250 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 7SK.11-201ENST00000615477 250 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 7SK.13-201ENST00000622040 250 ntBASIC2.17□□□□□ -2.06
USB1Q9BQ65 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USB1Q9BQ65 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
USB1Q9BQ65 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
USB1Q9BQ65 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
USB1Q9BQ65 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
USB1Q9BQ65 Y_RNA.258-201ENST00000364613 105 ntBASIC2.15□□□□□ -2.07
USB1Q9BQ65 Y_RNA.363-201ENST00000365529 113 ntBASIC2.15□□□□□ -2.07
USB1Q9BQ65 AL591704.2-201ENST00000421658 181 ntBASIC2.15□□□□□ -2.07
USB1Q9BQ65 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USB1Q9BQ65 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USB1Q9BQ65 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
USB1Q9BQ65 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
USB1Q9BQ65 SNORD116-24-201ENST00000384549 92 ntBASIC2.14□□□□□ -2.07
USB1Q9BQ65 MTND4LP19-201ENST00000403051 166 ntBASIC2.14□□□□□ -2.07
USB1Q9BQ65 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.14□□□□□ -2.07
USB1Q9BQ65 AC244098.3-201ENST00000424803 96 ntBASIC2.14□□□□□ -2.07
USB1Q9BQ65 RNU7-13P-201ENST00000516413 62 ntBASIC2.14□□□□□ -2.07
USB1Q9BQ65 AL078603.1-201ENST00000603824 313 ntBASIC2.14□□□□□ -2.07
USB1Q9BQ65 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
USB1Q9BQ65 MIR934-201ENST00000401241 83 ntBASIC2.13□□□□□ -2.07
USB1Q9BQ65 RNU6-994P-201ENST00000410507 111 ntBASIC2.13□□□□□ -2.07
USB1Q9BQ65 MIR4804-201ENST00000581683 73 ntBASIC2.13□□□□□ -2.07
USB1Q9BQ65 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USB1Q9BQ65 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
USB1Q9BQ65 RNA5SP425-201ENST00000410336 112 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 RNU4-53P-201ENST00000410828 140 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 RNU7-21P-201ENST00000459430 62 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 RN7SL429P-201ENST00000479090 223 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 RN7SL489P-201ENST00000486185 223 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 RN7SL327P-201ENST00000488659 223 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 RNU6-977P-201ENST00000516411 103 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 RN7SL853P-201ENST00000617250 223 ntBASIC2.12□□□□□ -2.07
USB1Q9BQ65 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
USB1Q9BQ65 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USB1Q9BQ65 RNU6-369P-201ENST00000362515 102 ntBASIC2.11□□□□□ -2.07
USB1Q9BQ65 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
USB1Q9BQ65 RNU1-119P-201ENST00000391122 165 ntBASIC2.11□□□□□ -2.07
USB1Q9BQ65 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
USB1Q9BQ65 AC103706.3-201ENST00000636297 85 ntBASIC2.11□□□□□ -2.07
USB1Q9BQ65 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USB1Q9BQ65 AL691482.2-201ENST00000457453 84 ntBASIC2.1□□□□□ -2.07
USB1Q9BQ65 RNU7-56P-201ENST00000458744 62 ntBASIC2.1□□□□□ -2.07
USB1Q9BQ65 MIR3945-201ENST00000581853 98 ntBASIC2.1□□□□□ -2.07
USB1Q9BQ65 MIR4511-201ENST00000582784 87 ntBASIC2.1□□□□□ -2.07
USB1Q9BQ65 RNU6-499P-201ENST00000365615 107 ntBASIC2.09□□□□□ -2.07
USB1Q9BQ65 SNORA70B-201ENST00000384210 135 ntBASIC2.09□□□□□ -2.07
USB1Q9BQ65 SNORA80D-201ENST00000384488 135 ntBASIC2.09□□□□□ -2.07
USB1Q9BQ65 MIR3198-2-201ENST00000577868 80 ntBASIC2.09□□□□□ -2.07
USB1Q9BQ65 MIR4298-201ENST00000584380 73 ntBASIC2.09□□□□□ -2.07
USB1Q9BQ65 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.07
USB1Q9BQ65 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USB1Q9BQ65 SNORD115-24-201ENST00000363528 82 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 RNU6-987P-201ENST00000384759 104 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 MIR100-201ENST00000385259 80 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 RNU1-78P-201ENST00000391248 165 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 RNU7-90P-201ENST00000459216 62 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 AC026436.1-201ENST00000510537 270 ntBASIC2.08□□□□□ -2.08
USB1Q9BQ65 SNORA31.14-201ENST00000516728 116 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms