Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU6-54P-201ENST00000365563 107 ntBASIC-2.2□□□□□ -2.76
CCDC42Q96M95 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.2□□□□□ -2.76
CCDC42Q96M95 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.2□□□□□ -2.76
CCDC42Q96M95 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.21□□□□□ -2.76
CCDC42Q96M95 MIR124-2-201ENST00000385081 109 ntBASIC-2.21□□□□□ -2.76
CCDC42Q96M95 SNORD2.1-201ENST00000458762 69 ntBASIC-2.21□□□□□ -2.76
CCDC42Q96M95 RNU6-718P-201ENST00000516166 105 ntBASIC-2.21□□□□□ -2.76
CCDC42Q96M95 MIR4696-201ENST00000581431 70 ntBASIC-2.21□□□□□ -2.76
CCDC42Q96M95 RNU6-664P-201ENST00000362381 107 ntBASIC-2.22□□□□□ -2.76
CCDC42Q96M95 RNU6-976P-201ENST00000516086 111 ntBASIC-2.22□□□□□ -2.76
CCDC42Q96M95 AC084782.3-201ENST00000612282 578 ntBASIC-2.22□□□□□ -2.76
CCDC42Q96M95 AC073869.6-201ENST00000640656 341 ntBASIC-2.22□□□□□ -2.76
CCDC42Q96M95 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.23□□□□□ -2.77
CCDC42Q96M95 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.23□□□□□ -2.77
CCDC42Q96M95 MIR548F1-201ENST00000408667 84 ntBASIC-2.23□□□□□ -2.77
CCDC42Q96M95 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.23□□□□□ -2.77
CCDC42Q96M95 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.23□□□□□ -2.77
CCDC42Q96M95 AC132825.6-201ENST00000638861 357 ntBASIC-2.23□□□□□ -2.77
CCDC42Q96M95 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.24□□□□□ -2.77
CCDC42Q96M95 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.24□□□□□ -2.77
CCDC42Q96M95 RNU6-337P-201ENST00000391243 106 ntBASIC-2.24□□□□□ -2.77
CCDC42Q96M95 RNU6-935P-201ENST00000410371 100 ntBASIC-2.24□□□□□ -2.77
CCDC42Q96M95 AC138207.3-201ENST00000585289 166 ntBASIC-2.24□□□□□ -2.77
CCDC42Q96M95 RNU6-235P-201ENST00000362644 107 ntBASIC-2.25□□□□□ -2.77
CCDC42Q96M95 Y_RNA.78-201ENST00000362970 110 ntBASIC-2.25□□□□□ -2.77
CCDC42Q96M95 RNU4-17P-201ENST00000365598 141 ntBASIC-2.25□□□□□ -2.77
CCDC42Q96M95 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.25□□□□□ -2.77
CCDC42Q96M95 RNU6-720P-201ENST00000516363 108 ntBASIC-2.25□□□□□ -2.77
CCDC42Q96M95 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.25□□□□□ -2.77
CCDC42Q96M95 AP000770.2-201ENST00000623694 100 ntBASIC-2.25□□□□□ -2.77
CCDC42Q96M95 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.26□□□□□ -2.77
CCDC42Q96M95 Y_RNA.150-201ENST00000363562 102 ntBASIC-2.26□□□□□ -2.77
CCDC42Q96M95 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.26□□□□□ -2.77
CCDC42Q96M95 AL365265.1-201ENST00000621045 234 ntBASIC-2.26□□□□□ -2.77
CCDC42Q96M95 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.27□□□□□ -2.77
CCDC42Q96M95 HLA-S-202ENST00000425174 53 ntBASIC-2.27□□□□□ -2.77
CCDC42Q96M95 MIR4744-201ENST00000581563 82 ntBASIC-2.27□□□□□ -2.77
CCDC42Q96M95 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2.27□□□□□ -2.77
CCDC42Q96M95 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 U3.27-201ENST00000391237 200 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 RNA5SP266-201ENST00000410273 108 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.28□□□□□ -2.77
CCDC42Q96M95 Y_RNA.6-201ENST00000362350 114 ntBASIC-2.29□□□□□ -2.78
CCDC42Q96M95 RNU4-24P-201ENST00000364565 139 ntBASIC-2.29□□□□□ -2.78
CCDC42Q96M95 RNU6-466P-201ENST00000391224 103 ntBASIC-2.29□□□□□ -2.78
CCDC42Q96M95 SNORD42B-201ENST00000458893 67 ntBASIC-2.29□□□□□ -2.78
CCDC42Q96M95 MTND3P22-201ENST00000510932 243 ntBASIC-2.29□□□□□ -2.78
CCDC42Q96M95 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.29□□□□□ -2.78
CCDC42Q96M95 SNORA63.6-201ENST00000364921 119 ntBASIC-2.3□□□□□ -2.78
CCDC42Q96M95 Y_RNA.365-201ENST00000365537 102 ntBASIC-2.3□□□□□ -2.78
CCDC42Q96M95 RNU6-479P-201ENST00000516348 105 ntBASIC-2.3□□□□□ -2.78
CCDC42Q96M95 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.31□□□□□ -2.78
CCDC42Q96M95 RNU6-643P-201ENST00000384018 107 ntBASIC-2.31□□□□□ -2.78
CCDC42Q96M95 MTATP6P21-201ENST00000440681 189 ntBASIC-2.31□□□□□ -2.78
CCDC42Q96M95 RNA5SP461-201ENST00000516451 104 ntBASIC-2.31□□□□□ -2.78
CCDC42Q96M95 YWHAEP3-201ENST00000582767 121 ntBASIC-2.31□□□□□ -2.78
CCDC42Q96M95 MIR451A-201ENST00000385059 72 ntBASIC-2.32□□□□□ -2.78
CCDC42Q96M95 RNU6-578P-201ENST00000390980 103 ntBASIC-2.32□□□□□ -2.78
CCDC42Q96M95 MIR1252-201ENST00000408861 65 ntBASIC-2.32□□□□□ -2.78
CCDC42Q96M95 RNU6-521P-201ENST00000516663 105 ntBASIC-2.32□□□□□ -2.78
CCDC42Q96M95 SNORA40.15-201ENST00000516884 107 ntBASIC-2.32□□□□□ -2.78
CCDC42Q96M95 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.32□□□□□ -2.78
CCDC42Q96M95 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.33□□□□□ -2.78
CCDC42Q96M95 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.33□□□□□ -2.78
CCDC42Q96M95 RNU6-651P-201ENST00000411040 105 ntBASIC-2.33□□□□□ -2.78
CCDC42Q96M95 RNU6-277P-201ENST00000516272 106 ntBASIC-2.33□□□□□ -2.78
CCDC42Q96M95 RNU6-208P-201ENST00000362431 107 ntBASIC-2.34□□□□□ -2.78
CCDC42Q96M95 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.34□□□□□ -2.78
CCDC42Q96M95 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.34□□□□□ -2.78
CCDC42Q96M95 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.34□□□□□ -2.78
CCDC42Q96M95 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.34□□□□□ -2.78
CCDC42Q96M95 AC026421.1-201ENST00000519101 163 ntBASIC-2.34□□□□□ -2.78
CCDC42Q96M95 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.35□□□□□ -2.79
CCDC42Q96M95 MIR29B1-201ENST00000385015 81 ntBASIC-2.35□□□□□ -2.79
CCDC42Q96M95 RNU6-770P-201ENST00000363929 105 ntBASIC-2.36□□□□□ -2.79
CCDC42Q96M95 RNU6-823P-201ENST00000391042 103 ntBASIC-2.36□□□□□ -2.79
CCDC42Q96M95 AP002392.1-201ENST00000537692 208 ntBASIC-2.36□□□□□ -2.79
CCDC42Q96M95 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.36□□□□□ -2.79
CCDC42Q96M95 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.38□□□□□ -2.79
CCDC42Q96M95 RNY3P15-201ENST00000516297 97 ntBASIC-2.38□□□□□ -2.79
CCDC42Q96M95 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.38□□□□□ -2.79
CCDC42Q96M95 MIR4464-201ENST00000580818 92 ntBASIC-2.38□□□□□ -2.79
CCDC42Q96M95 MIR4282-201ENST00000583613 67 ntBASIC-2.38□□□□□ -2.79
CCDC42Q96M95 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 SNORD115-19-201ENST00000363098 82 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 SNORD115-18-201ENST00000363293 82 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 SNORD115-17-201ENST00000364612 82 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.39□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms