Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 MIR548H1-201ENST00000408610 102 ntBASIC-1.88□□□□□ -2.71
USP54Q70EL1 RNU4-43P-201ENST00000410628 137 ntBASIC-1.88□□□□□ -2.71
USP54Q70EL1 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.88□□□□□ -2.71
USP54Q70EL1 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.88□□□□□ -2.71
USP54Q70EL1 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.88□□□□□ -2.71
USP54Q70EL1 MIR4696-201ENST00000581431 70 ntBASIC-1.88□□□□□ -2.71
USP54Q70EL1 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.89□□□□□ -2.71
USP54Q70EL1 RNU6-957P-201ENST00000363652 99 ntBASIC-1.89□□□□□ -2.71
USP54Q70EL1 SNORD115-23-201ENST00000364461 82 ntBASIC-1.89□□□□□ -2.71
USP54Q70EL1 SNORD101-201ENST00000384027 73 ntBASIC-1.89□□□□□ -2.71
USP54Q70EL1 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.89□□□□□ -2.71
USP54Q70EL1 AC037487.3-201ENST00000606668 112 ntBASIC-1.89□□□□□ -2.71
USP54Q70EL1 AL606534.2-204ENST00000635008 178 ntBASIC-1.89□□□□□ -2.71
USP54Q70EL1 UBE2WP1-201ENST00000362030 340 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 AC097510.1-201ENST00000510945 133 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 AC138907.4-201ENST00000570107 226 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 AC021443.1-201ENST00000604478 211 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 MIR559-201ENST00000385188 96 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 RNU6-130P-201ENST00000411112 103 ntBASIC-1.9□□□□□ -2.71
USP54Q70EL1 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.91□□□□□ -2.72
USP54Q70EL1 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.91□□□□□ -2.72
USP54Q70EL1 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.91□□□□□ -2.72
USP54Q70EL1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.91□□□□□ -2.72
USP54Q70EL1 MIR335-201ENST00000362173 94 ntBASIC-1.92□□□□□ -2.72
USP54Q70EL1 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.92□□□□□ -2.72
USP54Q70EL1 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.92□□□□□ -2.72
USP54Q70EL1 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.92□□□□□ -2.72
USP54Q70EL1 RNU7-164P-201ENST00000459221 62 ntBASIC-1.92□□□□□ -2.72
USP54Q70EL1 RNU6-719P-201ENST00000516671 104 ntBASIC-1.92□□□□□ -2.72
USP54Q70EL1 RNU6-762P-201ENST00000517107 102 ntBASIC-1.92□□□□□ -2.72
USP54Q70EL1 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 MIR548H3-201ENST00000408771 118 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 AL161932.1-201ENST00000437408 146 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 RNU6-90P-201ENST00000606352 106 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 RNU6-228P-201ENST00000362700 106 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 RNU7-123P-201ENST00000515911 60 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 SNORD116.3-201ENST00000517176 78 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 SNORD58B-201ENST00000607313 66 ntBASIC-1.93□□□□□ -2.72
USP54Q70EL1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
USP54Q70EL1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.94□□□□□ -2.72
USP54Q70EL1 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.94□□□□□ -2.72
USP54Q70EL1 RNY4P28-201ENST00000365281 93 ntBASIC-1.94□□□□□ -2.72
USP54Q70EL1 RNU6-54P-201ENST00000365563 107 ntBASIC-1.94□□□□□ -2.72
USP54Q70EL1 MIR582-201ENST00000365731 98 ntBASIC-1.94□□□□□ -2.72
USP54Q70EL1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.94□□□□□ -2.72
USP54Q70EL1 AP002392.1-201ENST00000537692 208 ntBASIC-1.94□□□□□ -2.72
USP54Q70EL1 RNU6-235P-201ENST00000362644 107 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 MIR29B1-201ENST00000385015 81 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 SNORD42B-201ENST00000458893 67 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 RNU6-240P-201ENST00000516098 97 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 MIR6818-201ENST00000621576 65 ntBASIC-1.95□□□□□ -2.72
USP54Q70EL1 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 SNORD81.2-201ENST00000365153 76 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.96□□□□□ -2.72
USP54Q70EL1 AL121914.1-201ENST00000450188 156 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 RNU6-415P-201ENST00000516252 97 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 AC073869.6-201ENST00000640656 341 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 RNU6-312P-201ENST00000364629 107 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 RNU6-616P-201ENST00000384353 107 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 RNU6-102P-201ENST00000384485 104 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 RNA5SP236-201ENST00000516169 116 ntBASIC-1.96□□□□□ -2.72
USP54Q70EL1 MIR4744-201ENST00000581563 82 ntBASIC-1.97□□□□□ -2.73
USP54Q70EL1 AC113139.1-201ENST00000605049 239 ntBASIC-1.97□□□□□ -2.73
USP54Q70EL1 SNORA25.1-201ENST00000362326 128 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.98□□□□□ -2.73
USP54Q70EL1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 RNU6-521P-201ENST00000516663 105 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 AC002553.4-201ENST00000616896 331 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 MIR3974-201ENST00000637126 96 ntBASIC-1.98□□□□□ -2.73
USP54Q70EL1 SNORA2.1-201ENST00000363089 137 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 RNU6-466P-201ENST00000391224 103 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 SNORD54-201ENST00000459159 67 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 AC091912.2-201ENST00000624798 167 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 SNORD116-6-201ENST00000384711 96 ntBASIC-1.99□□□□□ -2.73
USP54Q70EL1 RNA5SP93-201ENST00000362525 114 ntBASIC-2□□□□□ -2.73
USP54Q70EL1 RNU6-290P-201ENST00000365212 101 ntBASIC-2□□□□□ -2.73
USP54Q70EL1 Y_RNA.541-201ENST00000384640 113 ntBASIC-2□□□□□ -2.73
USP54Q70EL1 SNORD63.1-201ENST00000516178 80 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms