Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 SNORD115-23-201ENST00000364461 82 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-54P-201ENST00000365563 107 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-243P-201ENST00000391140 107 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 SNORD2.1-201ENST00000458762 69 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 AC138907.4-201ENST00000570107 226 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 MIR6773-201ENST00000612812 74 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 AP000770.2-201ENST00000623694 100 ntBASIC-1.44□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.45□□□□□ -2.64
TCRBV4S1A1TA0A5B7 SNORA63.7-201ENST00000365579 123 ntBASIC-1.45□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.45□□□□□ -2.64
TCRBV4S1A1TA0A5B7 AL121914.1-201ENST00000450188 156 ntBASIC-1.45□□□□□ -2.64
TCRBV4S1A1TA0A5B7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.45□□□□□ -2.64
TCRBV4S1A1TA0A5B7 MIR4723-201ENST00000585070 81 ntBASIC-1.45□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.46□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU4-24P-201ENST00000364565 139 ntBASIC-1.46□□□□□ -2.64
TCRBV4S1A1TA0A5B7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.46□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.46□□□□□ -2.64
TCRBV4S1A1TA0A5B7 U4.2-201ENST00000618561 85 ntBASIC-1.46□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 SNORD101-201ENST00000384027 73 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 MIRLET7B-201ENST00000385140 83 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-588P-201ENST00000410281 105 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-976P-201ENST00000516086 111 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-277P-201ENST00000516272 106 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 AC073869.6-201ENST00000640656 341 ntBASIC-1.47□□□□□ -2.64
TCRBV4S1A1TA0A5B7 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.48□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-103P-201ENST00000363686 107 ntBASIC-1.48□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU4-17P-201ENST00000365598 141 ntBASIC-1.48□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-651P-201ENST00000411040 105 ntBASIC-1.48□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNA5SP461-201ENST00000516451 104 ntBASIC-1.48□□□□□ -2.65
TCRBV4S1A1TA0A5B7 MIR4696-201ENST00000581431 70 ntBASIC-1.48□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.49□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.49□□□□□ -2.65
TCRBV4S1A1TA0A5B7 SNORD114-4-201ENST00000363962 75 ntBASIC-1.49□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.49□□□□□ -2.65
TCRBV4S1A1TA0A5B7 MIR124-2-201ENST00000385081 109 ntBASIC-1.49□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-337P-201ENST00000391243 106 ntBASIC-1.49□□□□□ -2.65
TCRBV4S1A1TA0A5B7 AL365265.1-201ENST00000621045 234 ntBASIC-1.49□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-664P-201ENST00000362381 107 ntBASIC-1.5□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-235P-201ENST00000362644 107 ntBASIC-1.5□□□□□ -2.65
TCRBV4S1A1TA0A5B7 SNORD38.2-201ENST00000384470 69 ntBASIC-1.5□□□□□ -2.65
TCRBV4S1A1TA0A5B7 SNORD42B-201ENST00000458893 67 ntBASIC-1.5□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-706P-201ENST00000517229 104 ntBASIC-1.5□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-935P-201ENST00000410371 100 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 MIR4744-201ENST00000581563 82 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.51□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.52□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-450P-201ENST00000364654 107 ntBASIC-1.52□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.52□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.52□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.52□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.52□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.53□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-643P-201ENST00000384018 107 ntBASIC-1.53□□□□□ -2.65
TCRBV4S1A1TA0A5B7 RNU6-823P-201ENST00000391042 103 ntBASIC-1.53□□□□□ -2.65
TCRBV4S1A1TA0A5B7 MIR1252-201ENST00000408861 65 ntBASIC-1.53□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.53□□□□□ -2.65
TCRBV4S1A1TA0A5B7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.53□□□□□ -2.65
TCRBV4S1A1TA0A5B7 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 RNU6-806P-201ENST00000365147 105 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 MIR451A-201ENST00000385059 72 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 RNU6-578P-201ENST00000390980 103 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 ELOCP20-201ENST00000422460 345 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 RNU6-521P-201ENST00000516663 105 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 SNORA40.15-201ENST00000516884 107 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.54□□□□□ -2.66
TCRBV4S1A1TA0A5B7 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 SNORA63.6-201ENST00000364921 119 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 SNORA62.4-201ENST00000365504 151 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 MT-TL1-201ENST00000386347 75 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 RNU6-466P-201ENST00000391224 103 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 SNORD19B-201ENST00000459623 84 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 AP002392.1-201ENST00000537692 208 ntBASIC-1.55□□□□□ -2.66
TCRBV4S1A1TA0A5B7 MIR1302-1-201ENST00000637932 143 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms