Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNU6-122P-201ENST00000516818 107 ntBASIC2.78□□□□□ -1.96
LHX6Q9UPM6 MIR6509-201ENST00000614603 85 ntBASIC2.78□□□□□ -1.96
LHX6Q9UPM6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.78□□□□□ -1.96
LHX6Q9UPM6 RNU6-859P-201ENST00000362728 107 ntBASIC2.77□□□□□ -1.97
LHX6Q9UPM6 RNU6-495P-201ENST00000362995 107 ntBASIC2.77□□□□□ -1.97
LHX6Q9UPM6 RNA5SP264-201ENST00000363115 107 ntBASIC2.77□□□□□ -1.97
LHX6Q9UPM6 RNA5SP299-201ENST00000391203 116 ntBASIC2.77□□□□□ -1.97
LHX6Q9UPM6 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
LHX6Q9UPM6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.77□□□□□ -1.97
LHX6Q9UPM6 MIR6817-201ENST00000615588 66 ntBASIC2.77□□□□□ -1.97
LHX6Q9UPM6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.77□□□□□ -1.97
LHX6Q9UPM6 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
LHX6Q9UPM6 RNA5SP450-201ENST00000411206 102 ntBASIC2.76□□□□□ -1.97
LHX6Q9UPM6 JTBP1-201ENST00000441314 247 ntBASIC2.76□□□□□ -1.97
LHX6Q9UPM6 RNU6-947P-201ENST00000516264 106 ntBASIC2.76□□□□□ -1.97
LHX6Q9UPM6 AC107016.2-201ENST00000547968 190 ntBASIC2.76□□□□□ -1.97
LHX6Q9UPM6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LHX6Q9UPM6 RNA5SP215-201ENST00000363440 122 ntBASIC2.75□□□□□ -1.97
LHX6Q9UPM6 RNU6-645P-201ENST00000364649 106 ntBASIC2.75□□□□□ -1.97
LHX6Q9UPM6 AL359511.1-201ENST00000402970 211 ntBASIC2.75□□□□□ -1.97
LHX6Q9UPM6 RNA5SP270-201ENST00000411361 118 ntBASIC2.75□□□□□ -1.97
LHX6Q9UPM6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.75□□□□□ -1.97
LHX6Q9UPM6 AC046143.2-201ENST00000609789 160 ntBASIC2.75□□□□□ -1.97
LHX6Q9UPM6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LHX6Q9UPM6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LHX6Q9UPM6 MIR216B-201ENST00000390186 82 ntBASIC2.74□□□□□ -1.97
LHX6Q9UPM6 RN7SKP123-201ENST00000410732 291 ntBASIC2.74□□□□□ -1.97
LHX6Q9UPM6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.74□□□□□ -1.97
LHX6Q9UPM6 MIR4648-201ENST00000580107 72 ntBASIC2.74□□□□□ -1.97
LHX6Q9UPM6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.74□□□□□ -1.97
LHX6Q9UPM6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LHX6Q9UPM6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LHX6Q9UPM6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
LHX6Q9UPM6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LHX6Q9UPM6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LHX6Q9UPM6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.73□□□□□ -1.97
LHX6Q9UPM6 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
LHX6Q9UPM6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LHX6Q9UPM6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.73□□□□□ -1.97
LHX6Q9UPM6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LHX6Q9UPM6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LHX6Q9UPM6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
LHX6Q9UPM6 RNA5SP425-201ENST00000410336 112 ntBASIC2.72□□□□□ -1.97
LHX6Q9UPM6 RNU6-92P-201ENST00000605893 104 ntBASIC2.72□□□□□ -1.97
LHX6Q9UPM6 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
LHX6Q9UPM6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LHX6Q9UPM6 RNA5SP245-201ENST00000364239 121 ntBASIC2.71□□□□□ -1.98
LHX6Q9UPM6 MIR203A-201ENST00000384836 110 ntBASIC2.71□□□□□ -1.98
LHX6Q9UPM6 MIR125B2-201ENST00000385128 89 ntBASIC2.71□□□□□ -1.98
LHX6Q9UPM6 AC244505.6-201ENST00000452829 130 ntBASIC2.71□□□□□ -1.98
LHX6Q9UPM6 snoU13.21-201ENST00000459368 105 ntBASIC2.71□□□□□ -1.98
LHX6Q9UPM6 NAMPTP3-201ENST00000569273 224 ntBASIC2.71□□□□□ -1.98
LHX6Q9UPM6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.98
LHX6Q9UPM6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LHX6Q9UPM6 U8.9-201ENST00000365667 134 ntBASIC2.7□□□□□ -1.98
LHX6Q9UPM6 RNU6-535P-201ENST00000384722 107 ntBASIC2.7□□□□□ -1.98
LHX6Q9UPM6 MIR512-1-201ENST00000384913 84 ntBASIC2.7□□□□□ -1.98
LHX6Q9UPM6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LHX6Q9UPM6 Y_RNA.355-201ENST00000365462 98 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 MIR7-2-201ENST00000384970 110 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 SUMO2P12-201ENST00000405924 140 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 RNA5SP274-201ENST00000410484 108 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 RNU4-88P-201ENST00000411220 86 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 MIR4658-201ENST00000584344 65 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 MIR3657-201ENST00000584818 117 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 AL645939.4-201ENST00000604495 135 ntBASIC2.69□□□□□ -1.98
LHX6Q9UPM6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LHX6Q9UPM6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LHX6Q9UPM6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
LHX6Q9UPM6 RNU6-302P-201ENST00000365249 107 ntBASIC2.68□□□□□ -1.98
LHX6Q9UPM6 SNORD83.1-201ENST00000411362 77 ntBASIC2.68□□□□□ -1.98
LHX6Q9UPM6 RNU6-56P-201ENST00000516986 93 ntBASIC2.68□□□□□ -1.98
LHX6Q9UPM6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LHX6Q9UPM6 RNU6-934P-201ENST00000365154 107 ntBASIC2.67□□□□□ -1.98
LHX6Q9UPM6 MIR9-1-201ENST00000385198 89 ntBASIC2.67□□□□□ -1.98
LHX6Q9UPM6 MIR4529-201ENST00000578110 78 ntBASIC2.67□□□□□ -1.98
LHX6Q9UPM6 AC008608.1-201ENST00000603910 127 ntBASIC2.67□□□□□ -1.98
LHX6Q9UPM6 AL359851.1-201ENST00000569460 4997 ntBASIC2.67□□□□□ -1.98
LHX6Q9UPM6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
LHX6Q9UPM6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LHX6Q9UPM6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LHX6Q9UPM6 RNU7-13P-201ENST00000516413 62 ntBASIC2.66□□□□□ -1.98
LHX6Q9UPM6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.65□□□□□ -1.98
LHX6Q9UPM6 SNORA9.2-201ENST00000365361 133 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 RNU6-260P-201ENST00000384092 107 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 SNORA46-201ENST00000384762 135 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 RNU4-53P-201ENST00000410828 140 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 UQCRHP3-201ENST00000451503 251 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 RNU6-1053P-201ENST00000515930 101 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 RNU6-1089P-201ENST00000516473 104 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 SNORA31.25-201ENST00000517242 134 ntBASIC2.65□□□□□ -1.99
LHX6Q9UPM6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
LHX6Q9UPM6 SNORD60.1-201ENST00000362451 73 ntBASIC2.64□□□□□ -1.99
LHX6Q9UPM6 Y_RNA.379-201ENST00000365653 102 ntBASIC2.64□□□□□ -1.99
LHX6Q9UPM6 RNU6-1126P-201ENST00000384002 107 ntBASIC2.64□□□□□ -1.99
LHX6Q9UPM6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX6Q9UPM6 RN7SL499P-201ENST00000481141 276 ntBASIC2.64□□□□□ -1.99
LHX6Q9UPM6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX6Q9UPM6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LHX6Q9UPM6 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 313.9 ms