Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
GFRA3O60609 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
GFRA3O60609 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
GFRA3O60609 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.62□□□□□ -1.99
GFRA3O60609 Y_RNA.13-201ENST00000362403 112 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 SNORA2.1-201ENST00000363089 137 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 MIR29C-201ENST00000385231 88 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 RNU7-26P-201ENST00000458980 63 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 RNU6-231P-201ENST00000517122 103 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 AC138907.6-201ENST00000568401 126 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 AC138869.1-201ENST00000568623 124 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 SNRPGP19-201ENST00000603826 189 ntBASIC2.62□□□□□ -1.99
GFRA3O60609 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
GFRA3O60609 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
GFRA3O60609 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
GFRA3O60609 SNORD113-2-201ENST00000391082 72 ntBASIC2.61□□□□□ -1.99
GFRA3O60609 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
GFRA3O60609 SNORA40.16-201ENST00000517238 121 ntBASIC2.61□□□□□ -1.99
GFRA3O60609 SNORA31.26-201ENST00000517250 137 ntBASIC2.61□□□□□ -1.99
GFRA3O60609 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.61□□□□□ -1.99
GFRA3O60609 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.61□□□□□ -1.99
GFRA3O60609 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GFRA3O60609 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
GFRA3O60609 ZNF355P-201ENST00000427301 3216 ntBASIC2.6□□□□□ -1.99
GFRA3O60609 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GFRA3O60609 RNU6-698P-201ENST00000363523 107 ntBASIC2.6□□□□□ -1.99
GFRA3O60609 RNU6-34P-201ENST00000364874 107 ntBASIC2.6□□□□□ -1.99
GFRA3O60609 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
GFRA3O60609 RNU7-174P-201ENST00000516248 59 ntBASIC2.6□□□□□ -1.99
GFRA3O60609 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
GFRA3O60609 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
GFRA3O60609 RNA5SP245-201ENST00000364239 121 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 SNORA41B-201ENST00000384785 128 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 RNU11-3P-201ENST00000391111 133 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 AL157398.1-201ENST00000452981 186 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 MIR18B-201ENST00000454574 71 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 SNORD42B-201ENST00000458893 67 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 RNA5SP481-201ENST00000516814 122 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.59□□□□□ -1.99
GFRA3O60609 SNORA50A-202ENST00000629536 136 ntBASIC2.59□□□□□ -1.99
GFRA3O60609 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
GFRA3O60609 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.58□□□□□ -2
GFRA3O60609 RNA5SP139-201ENST00000364340 117 ntBASIC2.58□□□□□ -2
GFRA3O60609 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
GFRA3O60609 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
GFRA3O60609 RNA5SP282-201ENST00000516355 108 ntBASIC2.58□□□□□ -2
GFRA3O60609 MIR548AG2-201ENST00000581228 64 ntBASIC2.58□□□□□ -2
GFRA3O60609 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.58□□□□□ -2
GFRA3O60609 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
GFRA3O60609 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
GFRA3O60609 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
GFRA3O60609 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
GFRA3O60609 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
GFRA3O60609 RNU6-580P-201ENST00000365159 107 ntBASIC2.57□□□□□ -2
GFRA3O60609 SNORD115-44-201ENST00000365391 82 ntBASIC2.57□□□□□ -2
GFRA3O60609 RNU6-54P-201ENST00000365563 107 ntBASIC2.57□□□□□ -2
GFRA3O60609 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
GFRA3O60609 SNORA64-201ENST00000384674 134 ntBASIC2.57□□□□□ -2
GFRA3O60609 SNORA46-201ENST00000384762 135 ntBASIC2.57□□□□□ -2
GFRA3O60609 MIR517B-201ENST00000385102 67 ntBASIC2.57□□□□□ -2
GFRA3O60609 MIR1283-2-201ENST00000408621 87 ntBASIC2.57□□□□□ -2
GFRA3O60609 SNORD111.1-201ENST00000516421 86 ntBASIC2.57□□□□□ -2
GFRA3O60609 MIR2115-201ENST00000516657 100 ntBASIC2.57□□□□□ -2
GFRA3O60609 RNA5SP380-201ENST00000517190 98 ntBASIC2.57□□□□□ -2
GFRA3O60609 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.57□□□□□ -2
GFRA3O60609 MIR4474-201ENST00000579189 78 ntBASIC2.57□□□□□ -2
GFRA3O60609 MIR548O2-201ENST00000616090 70 ntBASIC2.57□□□□□ -2
GFRA3O60609 MIR8070-201ENST00000616510 88 ntBASIC2.57□□□□□ -2
GFRA3O60609 MIR6516-201ENST00000630554 81 ntBASIC2.57□□□□□ -2
GFRA3O60609 AC016717.2-201ENST00000609089 5141 ntBASIC2.57□□□□□ -2
GFRA3O60609 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
GFRA3O60609 SNORA48.1-201ENST00000390879 135 ntBASIC2.56□□□□□ -2
GFRA3O60609 snoU13.25-201ENST00000458945 104 ntBASIC2.56□□□□□ -2
GFRA3O60609 RN7SL75P-201ENST00000461926 281 ntBASIC2.56□□□□□ -2
GFRA3O60609 RN7SL274P-201ENST00000492268 272 ntBASIC2.56□□□□□ -2
GFRA3O60609 RNU6-765P-201ENST00000516916 99 ntBASIC2.56□□□□□ -2
GFRA3O60609 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
GFRA3O60609 MIR377-201ENST00000362145 69 ntBASIC2.55□□□□□ -2
GFRA3O60609 RNU6-990P-201ENST00000364385 104 ntBASIC2.55□□□□□ -2
GFRA3O60609 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.55□□□□□ -2
GFRA3O60609 AC098934.3-201ENST00000430450 190 ntBASIC2.55□□□□□ -2
GFRA3O60609 RNU6-322P-201ENST00000516010 103 ntBASIC2.55□□□□□ -2
GFRA3O60609 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
GFRA3O60609 RNU6-1123P-201ENST00000362347 106 ntBASIC2.54□□□□□ -2
GFRA3O60609 RNU6-986P-201ENST00000363133 102 ntBASIC2.54□□□□□ -2
GFRA3O60609 Y_RNA.330-201ENST00000365230 109 ntBASIC2.54□□□□□ -2
GFRA3O60609 MIR548C-201ENST00000384815 97 ntBASIC2.54□□□□□ -2
GFRA3O60609 SNORD41-201ENST00000386967 70 ntBASIC2.54□□□□□ -2
GFRA3O60609 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.54□□□□□ -2
GFRA3O60609 RNU7-185P-201ENST00000459215 60 ntBASIC2.54□□□□□ -2
GFRA3O60609 RN7SL633P-201ENST00000488974 297 ntBASIC2.54□□□□□ -2
GFRA3O60609 SNORD59.2-201ENST00000516873 68 ntBASIC2.54□□□□□ -2
GFRA3O60609 snoU13.31-201ENST00000607291 104 ntBASIC2.54□□□□□ -2
GFRA3O60609 U2.7-201ENST00000619197 100 ntBASIC2.54□□□□□ -2
GFRA3O60609 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.54□□□□□ -2
GFRA3O60609 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.54□□□□□ -2
GFRA3O60609 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
GFRA3O60609 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
GFRA3O60609 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms